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SCNpilot_cont_500_bf_scaffold_12_107

Organism: SCNPILOT_CONT_300_BF_Novosphingobium_63_714

near complete RP 50 / 55 MC: 2 BSCG 51 / 51 MC: 1 ASCG 11 / 38
Location: 117110..117811

Top 3 Functional Annotations

Value Algorithm Source
OmpW n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6EBX0_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 54.6
  • Coverage: 240.0
  • Bit_score: 227
  • Evalue 1.10e-56
Outer membrane protein W {ECO:0000313|EMBL:GAO56663.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 52.0
  • Coverage: 229.0
  • Bit_score: 230
  • Evalue 3.20e-57
OmpW; K07275 outer membrane protein similarity KEGG
DB: KEGG
  • Identity: 50.4
  • Coverage: 228.0
  • Bit_score: 222
  • Evalue 1.20e-55

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Taxonomy

Novosphingobium sp. MD-1 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 702
ATGCGCAATTTCACCAAGGCTGCGGCCGCCCTGACCGCTCTTGCCGCCGCCACCATGATGGCCGGCGCGGCCCATGCCGAAGGCAAGGCCGACGGCAAGATCCAGTTCAAGGTGCTGGCCACCGCCGTTCTGCCGGATGGCGCGGTGAAGCAGGTCAAGACCGACGTTCTGGGCCTGGTGCCTGCCGCTGTGGGCAACACCGTGGCCAGCGACAATGTGACCCCCACCGTGTCGATCGAATATTTCTTTACGCCCAATATCTCGGTGGAAACCATCGCGGGCGTGACGGCGCACCATGTGTCGGCCTCGGCGGGCGCGCTTAAGGGCACCGAGCTGATCAGCAAGATCCACATCGTTCCGGCCACGCTGACCGCCAAGTATCATCTGCCGCTGGGCCACGGCATCAAGCCCTATATCGGCGCCGGTCCCGCCCTGTTCATCGTGCTGGCCGACGAGCCCAGCGCCGCGCTCAAGGCCGCGCTGCCCGCCGTCACCCGCACCAAGCTGAGCAGCGAATTCGGCGTGGCGCTTCAGGGCGGCATCGATATCGCGCTGGGCAAGGGCTATGGCCTGTCCTTCGACGCCAAGAAATACTGGGTCGGCACCGATGCCACCGTCTATGCCGGTTCGACCCGTGCCCTGGTGACCCGCAACAAGCTTGACCCGTGGGTGCTGAGCGCGGGCGTGTCCTACCGCTTCTAA
PROTEIN sequence
Length: 234
MRNFTKAAAALTALAAATMMAGAAHAEGKADGKIQFKVLATAVLPDGAVKQVKTDVLGLVPAAVGNTVASDNVTPTVSIEYFFTPNISVETIAGVTAHHVSASAGALKGTELISKIHIVPATLTAKYHLPLGHGIKPYIGAGPALFIVLADEPSAALKAALPAVTRTKLSSEFGVALQGGIDIALGKGYGLSFDAKKYWVGTDATVYAGSTRALVTRNKLDPWVLSAGVSYRF*