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SCNpilot_cont_500_bf_scaffold_92_11

Organism: SCNPILOT_EXPT_750_P_Variovorax_66_42

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(8342..9268)

Top 3 Functional Annotations

Value Algorithm Source
Periplasmic component of amino acid ABC-type transporter/signal transduction system n=1 Tax=Variovorax sp. CF313 RepID=J3CWN9_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 96.8
  • Coverage: 308.0
  • Bit_score: 592
  • Evalue 2.30e-166
  • rbh
Periplasmic component of amino acid ABC-type transporter/signal transduction system {ECO:0000313|EMBL:EJL80014.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.8
  • Coverage: 308.0
  • Bit_score: 592
  • Evalue 3.30e-166
extracellular solute-binding protein family 3 similarity KEGG
DB: KEGG
  • Identity: 67.7
  • Coverage: 297.0
  • Bit_score: 405
  • Evalue 1.30e-110
  • rbh

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 927
ATGACCCTCAAGCCAACCATTCACTCTGCCTTGATTCGTCCCTTCCTTGCCATCGCCGGACTCGCGTTGTGCGCCGGTGTCGCCGCGCAATCCGCGCCGCCGCTGGAGGGCACGCTCAAGAAGATCAAGGACACCGGGACGATCACGGTGGCCACGCGCGGCGCTTCGATCCCGTTCAATTACCTTGACGACAACAACAAGCAGGCCGGCTTTGCCTGGGAGATTGCGCAGCGCGTGGTCGACCAAGCGAAGAAGGACCTCAAGCTTGCGAAGCTGGAAGTCAAGACCCTGGAGGTCACGCCGCAGACGCGCATTCCGCTGGTGGCCAACCAGACCGTCGATCTGGAGTGCAGCTCGACGACGAACAACGCTGAGCGGCAGAACCAGGTGTCTTTCTCCACGACGTTCTTCGTCGTAGGCGCGCGGCTGCTGGTGCGCAAGAACTCCGGCATCAAGCATTGGTCTGACCTTGTCGGCAAGAACGTCGTGGTCAGTGCGGGCACCACCGCGGAGCGCATGCTGCGGCAGCTCAACGAGAAGAACAAGTGGGGCATCAACATCATCCTGGCCAAGGACATCAACGAGAACTTCCTGACCGTGGAGACGGGGCGTGCCGTTGCGGCGACGCAGGACGACATCATTCTCTTCAGCAACATTGCCCGCGCCAGGAACCCGGCGGACTGGGAGGTGGTCGGCGTGCCGCAGCAGAAGGAAGCCTATGGTTGCATGCTGCGCAAGGGCGATGTGGCGTTCAAGAAGCTGGTCGACGGCGTGATCACCGGAATGATGCGCTCGGGCGAGTTCGCCTCGCTGTACGAGAAGTACTTCCTGAAGCCCATTGCCGTGAAGGGCAGCGTGGCGGTCAACTTCCCAATGTCGCCCGACATGCAAGAGCTCCTGCGTCATCCGAACGACCAGCCGCTGTAA
PROTEIN sequence
Length: 309
MTLKPTIHSALIRPFLAIAGLALCAGVAAQSAPPLEGTLKKIKDTGTITVATRGASIPFNYLDDNNKQAGFAWEIAQRVVDQAKKDLKLAKLEVKTLEVTPQTRIPLVANQTVDLECSSTTNNAERQNQVSFSTTFFVVGARLLVRKNSGIKHWSDLVGKNVVVSAGTTAERMLRQLNEKNKWGINIILAKDINENFLTVETGRAVAATQDDIILFSNIARARNPADWEVVGVPQQKEAYGCMLRKGDVAFKKLVDGVITGMMRSGEFASLYEKYFLKPIAVKGSVAVNFPMSPDMQELLRHPNDQPL*