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SCNpilot_cont_500_bf_scaffold_41_39

Organism: SCNpilot_BF_INOC_Flavobacteriia_40_10

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 MC: 2 ASCG 13 / 38 MC: 1
Location: 42881..43579

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal large subunit pseudouridine synthase D; K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] similarity KEGG
DB: KEGG
  • Identity: 78.4
  • Coverage: 232.0
  • Bit_score: 370
  • Evalue 3.40e-100
  • rbh
Pseudouridine synthase, RluA family n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7VX18_9FLAO similarity UNIREF
DB: UNIREF100
  • Identity: 84.8
  • Coverage: 224.0
  • Bit_score: 395
  • Evalue 3.20e-107
  • rbh
Pseudouridine synthase {ECO:0000313|EMBL:KIC62386.1}; TaxID=363331 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium taiwanense.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.1
  • Coverage: 224.0
  • Bit_score: 401
  • Evalue 6.20e-109

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Taxonomy

Chryseobacterium taiwanense → Chryseobacterium → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 699
ATGCAGGCATTACGAAACTTTAGCGAATCGCAAATTTTGTACGAAGACAATCATCTTCTCGTCATCAACAAAAAAGTGGGACAACTGGTACAGGGTGATAAAACCGGTGATGAATCACTATTAGAACTGATTAAAGATTTTATTAAAAAACGCGATCAAAAACCCGGTAATGTTTTCTTGGGGTTGGTGCACCGAATTGACCGCCCGACTTCCGGTTTGGTGATTTATGCCAAAACTTCTAAAGCACTTTCGCGATTAACTCAAATGGTGAAAAATCGTGAGATCGAAAAAACCTACTGGGCTGTCGTTGCCAAAGAACTGATTCCACAATCCCAGCGTTTGGTGCATTACTTAAAGAAAAACCAAAAAACCAATAAAGCCACTGTTTTCCCAAAAGCGACGGACGGTGCGAAAGAATCGGTCCTGAAATACGAATTAATCAAGACTTTGGATCGATATCAACTTTTGGAAGTGGATCTGGAAACCGGGCGCCATCATCAAATCCGCGCGCAACTTGCTAAAATTGGCGTGCCGATAAAAGGCGATCTTAAGTACGGTTCGCCCCGTTCTAATCCGGATGGTGGAATTTCACTCCACGCCAGAAAGTTACATTTTAAACATCCTGTTACGAAGGAGGAAATTGAAATCGTTGCCCCCGTTCCTCAAAACGATGCTGTTTGGAAAGCATGTGAGGAATAA
PROTEIN sequence
Length: 233
MQALRNFSESQILYEDNHLLVINKKVGQLVQGDKTGDESLLELIKDFIKKRDQKPGNVFLGLVHRIDRPTSGLVIYAKTSKALSRLTQMVKNREIEKTYWAVVAKELIPQSQRLVHYLKKNQKTNKATVFPKATDGAKESVLKYELIKTLDRYQLLEVDLETGRHHQIRAQLAKIGVPIKGDLKYGSPRSNPDGGISLHARKLHFKHPVTKEEIEIVAPVPQNDAVWKACEE*