ggKbase home page

SCNpilot_cont_500_bf_scaffold_100_67

Organism: SCNpilot_BF_INOC_Flavobacteriia_40_10

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 MC: 2 ASCG 13 / 38 MC: 1
Location: 78302..81430

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Empedobacter brevis RepID=UPI0003655A8C similarity UNIREF
DB: UNIREF100
  • Identity: 84.5
  • Coverage: 999.99
  • Bit_score: 1684
  • Evalue 0.0
  • rbh
Multidrug transporter AcrB {ECO:0000313|EMBL:KEQ30723.1}; TaxID=1358423 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter antarcticus 4BY.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 60.3
  • Coverage: 999.99
  • Bit_score: 1258
  • Evalue 0.0
hydrophobe/amphiphile efflux-1 (HAE1) family transporter similarity KEGG
DB: KEGG
  • Identity: 57.6
  • Coverage: 999.99
  • Bit_score: 1199
  • Evalue 0.0
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pedobacter antarcticus → Pedobacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 3129
ATGCTAAAAACAATTATAAAAAGACCCGTACTCGCTACGGTGATCTCCATTATTTTGGTGATGTTGGGGATTTTGGGAATGTTGCGAATTCCAATGACGCAGTTTCCGGAAATTGCACCACCAACGGTTTTCGTATCGGGAACCTATCCCGGTGCCAATGCCGAAAGTGTGATCCGATCGGTGGTAACACCTTTGGAACAGGCCATCAACGGGGTTGAAAATATGCAGTATATGACTTCCAGTGCGTCCAACGACGGAAGTTTTTCCATTAACATTGTTTTCAAACAGGGTGTTGATCCGGATCAGGCGGCGGTAAATGTTCAGAACCGTGTGGCACAGGTGAATGCGCAGCTTCCGCAGGAAGTGATTCGGTTGGGACTGACGACCACCAAACAGCAGACGAGTTACCTGATGATTGTGAATATCAACAGCGAAAAACCCGACAAATACGATGAAGCATTTCTGCAAAACTATGCGAATATCAACCTGATTCCCGAACTGAAAAGGATTCCCGGTGTTGGAAATGTGAGCTTATTCGGTTCCAAAGAATATTCGGTGCGGGTGTGGATCAATCCTACGAAATTATCGTCTTACGGTTTGGTACCTTCCGATGTTGAAAACGCAATTCAGCAATATAGTTTTGAGGCCTCACCCGGAAGTTTGGGGCAAGAAACCGACGCTTCGTTACAATACGTTCTTCGGTACAAGGGTAAACTCAACAAACCCGAACAGTTTGAAAAAATCATCCTCAGCTCCAAAAAAGACGGTTCTATTTTGCGGCTGGGCGATGTGGCGCGGCTGGAATTTGGTTTGTCGAATTACTCCAGTGATACTTATACCGATGGCAAACCTTCGGTGGTATTTGCGGTGCTTCAGGCCAGTGGTTCCAATGCGAACGACATTGCCATAGAAGTGGACAAGTCCCTGAAAAGCTTTCAGAAAAGTGTGCCCGACGGAATTAAATTTGAGGTGATTCAAAACGTGAAAAATCGTTTGGATGCTTCCATTTCGCAGATGCAGTCGACCTTACTTGAGGCATTCGTCCTCGTATTTATTGTGGTTTTATTGTTTTTGCAGGATTTTCGTTCCACCATTATTCCGGCGATTGCCGTACCAGTTTCCATTGTCGGAACCTTCTTTTTCATTTACCTGATTGGTTTTTCCATCAATGTACTCACGCTATTTGCACTGGTGCTCGCCATCGGAATTGTGGTGGATGATGCCATTGTGGTGGTGGAAGCCGTGCACGCAAAAATGGAACATACCGGCGAAAATGCCCGTACTGCCACTGTTTCTGCAATGAGCGAAATCAGTGGGGCGATTGTTTCGATCACATTGGTGATGTCGGCGGTGTTTCTTCCGGTTGGTTTTATGGAAGGTCCGGCAGGGATTTTCTACAAACAGTTTTCCTACACCTTGGCCATTGCAATTTTAATTTCGGCGGTTAATGCATTGACGTTAAGTCCGGCTTTATGTGCATTGTTACTCAAAAATCACCATCACGGTGAAGGCAAAAGAAAAGCATTTACCCAACGGTTTGCCGATGCGTTTAATACCAGTTTCGAAAGACTTACCACTAAATATGTAGGCGCTGTACGCTTTTTGGGAAAGAAAAAGCTGATTGCAATGGGCGCTTTACTGCTGATTTCTATAGGCGCTTTTGTATTGATGAACAATGCGCAAAAAGGTTTTGTGCCCGAAGAAGACGATAATAACCTCACTTTTGTGGTGAATTTACAAGCCGGTGCCAATCTTCAGTTCATTACCAAAGAAATGGAAAAGGCCACCAAAATTGCCGAATCACTACCGGAAATTAAGAGCATCAGTACCATTTCGGGCTTCAGTCTTTTCAGTTCGGGCGTGTCGCCCAATGCGGCGATTGGTTTCATCACCCTGAAAAAACCAAAAGATCGAGGCAAAGTGTCCAACATCAATGATGTGATGCACAAGATCGAAAAAGCAATGAAAGGCAAAATCCGTGGCGAATTTCTGATTTTCCGTAATCCTGCGGTAGAAGGTTTTGGGAATGCCGGCGGTGTTGAATTTGTGTTGCAGGACAGGACCTCGGGCGATATCAACAAGTTCGAAAATGTCAGCCGAAAAATGATCAGCTCGCTCAGCAAACACCCCGAAATTGGGATGGCTTTTACCACATTCCGAAGCGATTATCCGCAGTACGAAGTGGAGCTCAACGAAGACAAAGCACAACAATTGGGCTTAACACCTAAAGAAGTGATGGATGCATTGCAATTATATTTAACAGGATCGCAAACCACTGATTTTATTCGTTTTGGTCGTTTGTACCGCGTGAATGTGCGTTCCGAAGCCGAGTTCAGAAAAAATGAAGCGTCGTTGGATAATATTATGATTCGAAATAACCTCAATCAAATGGTGCCGATTTCAACTTTGGTGACGCTCAAAAAAGTATTTGGTCCGCAGGGAATCAGCCGTTACAATCTGTACAACAGCATCAGCGTGAATGTCAATGCCGGCACAGGTGCTAGTACCGGGAAAGTGATGAGTGTGATTGATGAGGTGCTGCAAAAAGAATTGCCGAAAGGATACAGCTACGAGTACAACGGATTGGCATTGCAGGAGCGAAAATCTGGTTCGCAGATGGTTTTCATTTTCGCGCTGAGTATTTTGTTTGTGTACTTCCTTTTGTCTGCCCAGTACGAAAGTTATCTTTTGCCATTAGCGGTGATATTGTCTTTGCCGACAGGGATTTTGGGTGTGTTTATCGCCACCGGATTTGCTGGATTGGACAACAATATTTATGTCCAGATTGCCTTAGTAATGCTCATTGGTTTGCTCGCTAAGAATGCCATTTTGATTGTGGAATTTGCCGTGCAGCAGCGCAAGGCGGGACTCTCCATTTTTGATGCGGCGATTGCCGGAGCGCGGATGCGTTTGCGACCGATTTTGATGACTTCCTTTGCCTTCGTGGCAGGTTTGGTTCCGTTGATGTTTGCGTCGGGCGGTACTGCGATTGGAAATAAATCCATCAGTATCAGTGCGGCAGGCGGAATGTTGAGTGGTGTGTTACTCGGATTGCTGATTATTCCGGTATTGTATATGATTTTCCAGAGTTTACAGGAAAAAATTTCAGCGAATAAAAATTTAGATTGA
PROTEIN sequence
Length: 1043
MLKTIIKRPVLATVISIILVMLGILGMLRIPMTQFPEIAPPTVFVSGTYPGANAESVIRSVVTPLEQAINGVENMQYMTSSASNDGSFSINIVFKQGVDPDQAAVNVQNRVAQVNAQLPQEVIRLGLTTTKQQTSYLMIVNINSEKPDKYDEAFLQNYANINLIPELKRIPGVGNVSLFGSKEYSVRVWINPTKLSSYGLVPSDVENAIQQYSFEASPGSLGQETDASLQYVLRYKGKLNKPEQFEKIILSSKKDGSILRLGDVARLEFGLSNYSSDTYTDGKPSVVFAVLQASGSNANDIAIEVDKSLKSFQKSVPDGIKFEVIQNVKNRLDASISQMQSTLLEAFVLVFIVVLLFLQDFRSTIIPAIAVPVSIVGTFFFIYLIGFSINVLTLFALVLAIGIVVDDAIVVVEAVHAKMEHTGENARTATVSAMSEISGAIVSITLVMSAVFLPVGFMEGPAGIFYKQFSYTLAIAILISAVNALTLSPALCALLLKNHHHGEGKRKAFTQRFADAFNTSFERLTTKYVGAVRFLGKKKLIAMGALLLISIGAFVLMNNAQKGFVPEEDDNNLTFVVNLQAGANLQFITKEMEKATKIAESLPEIKSISTISGFSLFSSGVSPNAAIGFITLKKPKDRGKVSNINDVMHKIEKAMKGKIRGEFLIFRNPAVEGFGNAGGVEFVLQDRTSGDINKFENVSRKMISSLSKHPEIGMAFTTFRSDYPQYEVELNEDKAQQLGLTPKEVMDALQLYLTGSQTTDFIRFGRLYRVNVRSEAEFRKNEASLDNIMIRNNLNQMVPISTLVTLKKVFGPQGISRYNLYNSISVNVNAGTGASTGKVMSVIDEVLQKELPKGYSYEYNGLALQERKSGSQMVFIFALSILFVYFLLSAQYESYLLPLAVILSLPTGILGVFIATGFAGLDNNIYVQIALVMLIGLLAKNAILIVEFAVQQRKAGLSIFDAAIAGARMRLRPILMTSFAFVAGLVPLMFASGGTAIGNKSISISAAGGMLSGVLLGLLIIPVLYMIFQSLQEKISANKNLD*