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SCNpilot_cont_500_bf_scaffold_5036_2

Organism: SCNPILOT_EXPT_300_BF_Stenotrophomonas_69_97

partial RP 32 / 55 MC: 2 BSCG 34 / 51 MC: 5 ASCG 10 / 38 MC: 1
Location: comp(611..4237)

Top 3 Functional Annotations

Value Algorithm Source
RecBCD enzyme subunit RecB {ECO:0000256|HAMAP-Rule:MF_01485}; EC=3.1.11.5 {ECO:0000256|HAMAP-Rule:MF_01485};; Exonuclease V subunit RecB {ECO:0000256|HAMAP-Rule:MF_01485}; Helicase/nuclease RecBCD subunit RecB {ECO:0000256|HAMAP-Rule:MF_01485}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.6
  • Coverage: 999.99
  • Bit_score: 1497
  • Evalue 0.0
recB; putative exodeoxyribonuclease V beta chain; K03582 exodeoxyribonuclease V beta subunit [EC:3.1.11.5] similarity KEGG
DB: KEGG
  • Identity: 63.5
  • Coverage: 999.99
  • Bit_score: 1436
  • Evalue 0.0
  • rbh
exodeoxyribonuclease V subunit beta n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0003009483 similarity UNIREF
DB: UNIREF100
  • Identity: 63.9
  • Coverage: 999.99
  • Bit_score: 1441
  • Evalue 0.0
  • rbh

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Taxonomy

Stenotrophomonas rhizophila → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 3627
ATGAGCGCCGCGCCGCTTGCGACCGACCCGTACCTGGACCTGCCGCTGGACGGCCTGCGCCTGATCGAGGCCAGCGCCGGTACCGGCAAGACCTTCACCCTGGCCACCCTGTTCACCCGCCTGGTGGTGGAGCAGAACCTGCGCATGGGCCAGATCCTGGCGGTGACCTTCACCGACGCGGCCACCCAGGAACTGCGCCGGCGCATCCGCGAGCGCCTGGACCTGGCCGCGCGGCTGGCCGACGCCGTGCCGGGGCCGGGCGACGGCAACGAAGCCGCGCTGACCAGCGCCATCCTGCAGCGCCATCTGCAGCAGGGCACGGAAACCGCCGCGCAGCTGGCCCGGCGCCTGCGCATCGCCGCCGAGGAAACCGACCTGGCGGCGATCTTCACCATCCACGGCTTCTGCACCCGGGTGCTGGCCGAGCACGCGCTGGAAAGCGGCCACAGCTTCGCCGCGCCGGAACTGCTGACCAACACCCGCCAGCTCCACGCCGGGCTCGCCGCCGACCTGTGGCGCCAGCATGCCGCCCGCGCCGATGTACTGGCGGCCCTGACCGGCCTGTGGAAAAGCCCGGACGCGCTGGCGGCCGACCTGCCGGTGCTGGTCGCCGACCTGCCGCTGCTGCCGACGCTGCCGCCGGCGCCGCTGGACGATGCCCGTCCGCTGCGCGATGCCGCCGCCGGGCGCCTTGCCGCCGGGCTGGCCACGCATGGCGAGGCGTACCTGCACCAGCTGCGCGCCGCGCTGGAAGGCGGCGTGCTCAACAGGAGCAGCTACAAGGCCGAGTGGATCGAACCGCTGTTCCGGCAACTGCTGCAGTGGGCCCGGCATCCGGATCCGGATGCCGCGCTGGATGACCGGCTGCAGCGGCTGACCCTCGACGCGCTCACCGCCAGGACCGTCAAGGCCAAGGCCGGCAGCACCCCGGTGTCGCCGCTGCAGCCGCTGATCGCCGACTACGCGCAGGCACAGGCACGCTTCGGCGAGTGGCGCATGCAGCAGTCCATCGCCCTGCTGCATGCGCTGCGCGATGAAGCCCGCCAGCGCCTGGCACGGCACAAGCAGCAGTACCGCGTGCAGACCTATGACGACCTGATCGACGGCGTGCATGCGGCGCTGGACGGCGAAGCCGGCGCGGCGCTGGCCGAACGCCTGCGTGCGCAGTACCGCTTCGCCCTGGTCGACGAATTCCAGGACACCGACCCGCGGCAGTGGGACATCTTCCGCCGGGTGTTCGCCGAACCGCCCGCCACTGCCGCGCTGTTCCTGATCGGCGATCCCAAGCAGGCCATCTACGGCTTCCGCGGCGGCGACGTGCATACCTACCTGCAGGCCCGCGAACGCGCCGCCGAGGCGCCGCGGCTGGCGCACAACTTCCGCTCGCGCCCCGGCCTGCTGCGCGCGATCGACGCGCTGTACGCCAACGCCGGCGACCGTGCCTTCGTCGATCCTCGGATCCGTTTCGAACCGGTGCAGGCCGGCAGCAAGCGGGGCGATGCCGACTACCTGCTCGATGGCGCCCCGGCCCCGGCGTTGACCCTGCACCTGATCGAAGCCGATGCCGACGGCAAGCCGCTCAAGGCCGACGACTCGCGGCACGCCGCCACCCTGGCCTGCGTGGCCGACATCCACCGCGTGCTGTCCGCCGCACGCCAGGACAGGGCGCGGGTCGATGGTCGCCCGCTGCGCCCGGGTGACATCGCCGTGCTGGTGCGCTCGCACCGCGAGGCCACGCGCATCCAGCAGGCGCTGGCGGCGGCGGCGATCCCGGCGGTCGCCGCCGGCCGCCACAGCCTGTTCTCCACCGCCGAGGCGCACGAACTGCGCCTGCTGCTGCTGGCGCTGCTGCAGCCGGCCGACGAAGGCCGCCTGCGTGCGGCGCTGGCCACCGTGCTGCTGGGCGAAAGCGCCGCCGGCATCGCCGCGATGGAACACGATGGCGAGCGCCAGCGCACGCACCAGGAACGCCTGCTGCAATGGCGCGAGCGCTGGCAGCGTGGCGGCGTGCTGGCGATGCTGTCCGACCTGTGCGCGGAACAGGCCGAACGCCTGCTGGCGCTGGTCGACGGCGAGCGCCGCTTGACCAACTACCTGCAGCTGGGCGAACTGCTGCAGGAGGCCGGCACCCGCAGCATCGGCCTGCATGGCCTGCTGGATTGGCTGCAGGCGCGCATCGCCCATGCCGACGACGGCGACGAGACCCAGCTGCTGCGCCTGGAATCGGACGCGCACCGGGTCCAGGTCATCACCCTGCACAAGAGCAAGGGCCTGGAGTACCCGCTGGTCTACCTGCCGTTCGTCGGCATCGACGGCGGCGCGCCGGCCACCGATGCCCACCGCATCGTGCACGACGGTGAGCGGCGCGTGCTGCACTGGAAGATCGACAAGGACGCGGCCGACTGGAAGGCTGTCGGCCAGCAGGCTGCCGCCGAGGACGCGGCCGAAGCCGCGCGCCTGCTGTACGTCGGCCTGACCCGCGCCGAGCACGCGCTGTGGATCGCCGGCGGCGCGCTGGCGGGGCTGCCCGGCTCGCAGCTGGGGCCGATGCTCGGCGACCTGGAACGCCTGGCCGCGCATGCCGACATCCGCATCGTCGAAGGTGGCGCGGACGCGCTGCCACCGCGCCTGGCGCCCGTGCGCGAGCCGGCGTTGCCGCCGGTGCGCGGCGTGCGCCGCGCGCTGTCGCAGGACTGGTGGGTGTACAGCTTCACCCAGCTCGCCCACGCCGAGGCCGGCCACGACACCGCGGCCGCGGCCACCGAGGACAGCGGCGGTGCCGCCGACGAGCCGCCGCAGGCCGCCGACGAGGCGGTGCAGGATCCGGCGGTGGCGCAGGATGCGTTCGATCCGCGCTTCGCCGGCAGCCGCTTCGGCAACGTGCTGCACGCGGCGCTGGAGACCACCGAGTTCGGCGCCTGGAGCGGCTGGCGGCCCGGCGACGACGCGCCTGCGGGGCAGGCCGGAGTGATTGCCGCGGCACTGCGCGCCGAAGGCTATGCCGAGGCCGACATCGACGACGGCGTGGCCCTGCTCACCGCGCTGGTCGGCCAGACCCTGACCGTGGCCCTGCCCGAGGGCGGCGCGCTGCATGCGCTGGGGCCCGGCGAGCGCCGCGCCGAAATCGAATTCCACTTCGCCATGCAGCCCACCGCGGTGCCGGCACTGCTGCGCGTGCTGCACGCGCATGGCGTGGTGCGCGGCCGCCACGGCTTCGGCGCGCGTGGCCGCCTGGAAGGACTGATGACCGGCAAGATCGACCTGACCTACCTGCGCGATGGGCGCTGGTACGTGCTCGACTACAAGTCCAACCGCCTGCCCGGCTACGCCGCGGCGCAACTGGAGGTGGCCATGCGCCACAGCGAGTACGACCTGCAGGCGCTGATCTATACCGTGGCGCTGCACCGCTGGCTGCGCTTCCGGCTTGGCGGCGGCTACGACTACGCGCGTGATTTCGGCGGCATCCGCTACCTGTTCTGCCGTGGCCTGGACGCGACCCGCGTGCCGTCGCCGGGCGTATACGCGCATGTCTTCGCGGCGGAACTGGTGCATGCGCTGGACGCGCTGTTCGCCGGCGGCGATGACGCCCACGCGGCCATGCTGGCGCGCCTGGGAGACCGCGCATGA
PROTEIN sequence
Length: 1209
MSAAPLATDPYLDLPLDGLRLIEASAGTGKTFTLATLFTRLVVEQNLRMGQILAVTFTDAATQELRRRIRERLDLAARLADAVPGPGDGNEAALTSAILQRHLQQGTETAAQLARRLRIAAEETDLAAIFTIHGFCTRVLAEHALESGHSFAAPELLTNTRQLHAGLAADLWRQHAARADVLAALTGLWKSPDALAADLPVLVADLPLLPTLPPAPLDDARPLRDAAAGRLAAGLATHGEAYLHQLRAALEGGVLNRSSYKAEWIEPLFRQLLQWARHPDPDAALDDRLQRLTLDALTARTVKAKAGSTPVSPLQPLIADYAQAQARFGEWRMQQSIALLHALRDEARQRLARHKQQYRVQTYDDLIDGVHAALDGEAGAALAERLRAQYRFALVDEFQDTDPRQWDIFRRVFAEPPATAALFLIGDPKQAIYGFRGGDVHTYLQARERAAEAPRLAHNFRSRPGLLRAIDALYANAGDRAFVDPRIRFEPVQAGSKRGDADYLLDGAPAPALTLHLIEADADGKPLKADDSRHAATLACVADIHRVLSAARQDRARVDGRPLRPGDIAVLVRSHREATRIQQALAAAAIPAVAAGRHSLFSTAEAHELRLLLLALLQPADEGRLRAALATVLLGESAAGIAAMEHDGERQRTHQERLLQWRERWQRGGVLAMLSDLCAEQAERLLALVDGERRLTNYLQLGELLQEAGTRSIGLHGLLDWLQARIAHADDGDETQLLRLESDAHRVQVITLHKSKGLEYPLVYLPFVGIDGGAPATDAHRIVHDGERRVLHWKIDKDAADWKAVGQQAAAEDAAEAARLLYVGLTRAEHALWIAGGALAGLPGSQLGPMLGDLERLAAHADIRIVEGGADALPPRLAPVREPALPPVRGVRRALSQDWWVYSFTQLAHAEAGHDTAAAATEDSGGAADEPPQAADEAVQDPAVAQDAFDPRFAGSRFGNVLHAALETTEFGAWSGWRPGDDAPAGQAGVIAAALRAEGYAEADIDDGVALLTALVGQTLTVALPEGGALHALGPGERRAEIEFHFAMQPTAVPALLRVLHAHGVVRGRHGFGARGRLEGLMTGKIDLTYLRDGRWYVLDYKSNRLPGYAAAQLEVAMRHSEYDLQALIYTVALHRWLRFRLGGGYDYARDFGGIRYLFCRGLDATRVPSPGVYAHVFAAELVHALDALFAGGDDAHAAMLARLGDRA*