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SCNpilot_cont_500_bf_scaffold_6006_17

Organism: SCNPILOT_EXPT_300_BF_Stenotrophomonas_69_97

partial RP 32 / 55 MC: 2 BSCG 34 / 51 MC: 5 ASCG 10 / 38 MC: 1
Location: 15546..16538

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, LysR family n=2 Tax=Stenotrophomonas maltophilia RepID=B4SNK7_STRM5 similarity UNIREF
DB: UNIREF100
  • Identity: 94.5
  • Coverage: 330.0
  • Bit_score: 618
  • Evalue 3.30e-174
  • rbh
Stenotrophomonas maltophilia strain ZBG7B contig_12, whole genome shotgun sequence {ECO:0000313|EMBL:KIP87304.1}; TaxID=40324 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (Pseudomonas maltophilia) (Xanthomonas; maltophilia).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.8
  • Coverage: 330.0
  • Bit_score: 619
  • Evalue 2.70e-174
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 94.5
  • Coverage: 330.0
  • Bit_score: 618
  • Evalue 1.00e-174
  • rbh

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Taxonomy

Stenotrophomonas maltophilia → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 993
ATGCAGGACCTCAACGACCTCTACTACTTCGCGATGGTGGTGGATCATGGCGGTTTCGCCGCCGCCGAGCGTGCGCTGGGCATCCCCAAATCGCGCCTGAGCCGGCGCATCAGCCAGCTGGAAACCGACCTGGGCGTGCGCCTGCTGCAGCGCTCGACGCGCCGCTTCGCGGTGACCGACGTGGGCATGAGCGTGCACCGCCATGCCCAGACCATGCTGGCCGAGGCGCAGGCCGCGCGCGAGGTGGTGGACCGGCTCAGTGCCGAGCCGCGCGGGCTGGTACGCGCCAGCGTGCCGGTGTCGCTGGCGCAGATGCAGCTGCCCAAGCTGCTGCCGAAGTTCCTCGAGCAGTATCCGAAGGTGCGGCTGCAGCTGAACATCAGCAACCGCCGGGTGGACATCATCAACGAGGGCTACGACGTGGCGCTGCGGGTACGCTCGCGGCTGGACGACGACGGCAGCCTGGTGATGCGCAGCTTCGGCCAGGTGCAGGAACTGCTGGTGGCCAGCCCGAAGTACCTGGACCGCGCCGGCCGCCCGAAGACGCCCGAGGACCTTGCCCAGCACGTCACCCTGAGCATCAGCGAGGACGAGGCGCGGCAGCGCTGGGAACTGCACGGCCCGGGCGGCGTGGTCAGCCGCGTGGACCTGCAGCCGCGCGTGGCCGGTTTCGATTTCCCGCTGCTGCAGAGCATGGTCAAGGATGGCTTCGGCATCACCATGCTGCCGGAAACGGTCTGCGCCGAAGCGGTGCGCAGCGGCGAGCTGGAAGTGGTGCTGCCGGACTGGTCGCTGCCGCAGGGCATCTGCCATGCGGTGTTCGCCTCGCGGCGCGGGCTGTTGCCGGCGGTACGGGTGTTCATCGATTTCCTCGCCGAGCACCTGCCGCCGCAGCTGGAAGCCTCGCGCCTGGACTGCGGCGGCGCCTGCGAGCGCGCCAAGGAGAAGATCCGCGCCTCGACCATGGGCGCGCTGGCGATCGAGGCCGGTTGA
PROTEIN sequence
Length: 331
MQDLNDLYYFAMVVDHGGFAAAERALGIPKSRLSRRISQLETDLGVRLLQRSTRRFAVTDVGMSVHRHAQTMLAEAQAAREVVDRLSAEPRGLVRASVPVSLAQMQLPKLLPKFLEQYPKVRLQLNISNRRVDIINEGYDVALRVRSRLDDDGSLVMRSFGQVQELLVASPKYLDRAGRPKTPEDLAQHVTLSISEDEARQRWELHGPGGVVSRVDLQPRVAGFDFPLLQSMVKDGFGITMLPETVCAEAVRSGELEVVLPDWSLPQGICHAVFASRRGLLPAVRVFIDFLAEHLPPQLEASRLDCGGACERAKEKIRASTMGALAIEAG*