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SCNpilot_cont_500_bf_scaffold_5706_9

Organism: SCNPILOT_EXPT_300_BF_Stenotrophomonas_69_97

partial RP 32 / 55 MC: 2 BSCG 34 / 51 MC: 5 ASCG 10 / 38 MC: 1
Location: 8533..11217

Top 3 Functional Annotations

Value Algorithm Source
ATP dependent RNA helicase; K03578 ATP-dependent helicase HrpA [EC:3.6.4.13] similarity KEGG
DB: KEGG
  • Identity: 78.3
  • Coverage: 784.0
  • Bit_score: 1205
  • Evalue 0.0
ATP dependent RNA helicase n=2 Tax=Xanthomonas campestris pv. campestris RepID=Q4UXI9_XANC8 similarity UNIREF
DB: UNIREF100
  • Identity: 78.3
  • Coverage: 784.0
  • Bit_score: 1205
  • Evalue 0.0
Strain LMCP11 contig_2, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ29838.1}; TaxID=339 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas campestris.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.3
  • Coverage: 784.0
  • Bit_score: 1207
  • Evalue 0.0

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Taxonomy

Xanthomonas campestris → Xanthomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2685
ATGAGCGCTATCGAAAAGGACACTGCCGCGCGCCTGCGCGAAGCCCGCACGGCCATCGACGGGGCGATGAGCCGCGACCGCGGGCGACTGCTCGGGCTGTGGTCGCGCTGGCAGGGCCGGCCGGCCGATGCCGCCGCCGAAGCGGCGTTCCGCGGCCTGCTGGAACAGTCCCGGGGCCAGCGCCGGCGGCGTGCGGCGCAGCCGGTCGCGATCAGCATGGACGACGCGCTGCCGATCGCGCGTGAAGCCGAGCGGATCACCGCGCTGATCCGCGACCACCAGGTGGTGGTGATCGCCGGCGAGACCGGTTCGGGCAAGACCACCCAGCTGCCCAAGCTGTGCCTGGCCGCCGGGCGCGGCGAGGCCGGCATGATCGGCTGCACCCAGCCGCGGCGCATCGCCGCGCGCGCGGTGGCCACCCGCGTGGCCGAGGAACTGGGCAGCGAACTGGGCACGGTGGTCGGCTACCAGGTGCGCTTCACCGACAAGGTCGGCGAGGACAGCCGCATCAAGTTCATGACCGACGGCATCCTGCTGGCCGAGATCGCGTCCGACCGCTGGCTGTCGCGTTACGACACGCTGATCATCGACGAGGCGCACGAACGCAGCCTCAACATCGATTTCCTGCTCGGCTATCTCAAGCAGCTGCTGCGCCGGCGCCCGGACCTGAAGCTGGTGGTGACCTCGGCGACCATCGACACCGAGCGCTTCTCGCGTCATTTCGACGATGCGCCGGTGGTCAGCGTCGAGGGCCGCACCTACCCGGTGGAAGTGCGCTACCGGCCGCTGGACGAGGCGCGGCCGGCGCCGGTCGCAGAGGGCAGGGGCGGTGGACGCGGGCGCGGCGACGATGCCGACTCGGACCCGGTGTCGGTCAATGACGCCATCGTCGCCGCGGTCGACGAGATCACCCGCCTGGATCCGCGCGGCGACGTGCTGGTGTTCCTGCCCGGCGAGCGCGAGATCCGCGACGCGCACCAGGCGCTGGAACGGCGCAAGTACCGCGAGACCGAGGTGCTGCCGCTGTACGCGCGGCTCTCGGCCAAGGACCAGGACCGGGTGTTCAACCCGGGGCCGAAGCGGCGCCTGGTGCTGACCACCAACGTCGCCGAGACCTCGCTGACGGTGCCGCGCATCCGGTACGTGGTCGATCCGGGCTACGCCCGGGTCAAGCGCTACAGCCCGCGGCAGAAGCTGGACCGGCTGCACATCGAACCGGTGTCGCAGGCCAGCGCCAACCAGCGCAAGGGCCGCTGCGGGCGTATCGCCGAGGGCGTGTGCTACCGCCTGTACGCCGAGGCTGATTTCCAGGCGCGCCCGGAATTCACCGATCCGGAGATCCGCCGTTCCTCGCTGGCCGGGGTGATCCTGCGCATGCTGCAGCTGGGCCTCGGGCGGATCGAGGATTTCCCGTTCCTGGAGCCGCCGGACGAACGCGCGGTCGCCGACGGCTGGCAGCAGCTGGCCGAGCTGGGCGCGATCGACGGCGAGCGCAAGCTCACCGCCATCGGCCGGCAGATGGCGCGGTTGCCGGTGGACGTGAAGCTGGCGCGCATGCTGGTGGCCGCGCAGAAGGCCGGCTGTCTGCACGAGATGCTGGTGATCGCCTCCTTCCTGGGCATCCAGGACCCGCGCGAACGGCCGCCGGAAGCGCGCGAGGCCGCCGACAACGCGCATGCGGCCTTCGCCGACCCGCGTTCGGAATTCCTCGGCATCCTGCGCCTGTGGGAAGGCTACCGGGCCGCGCACGAAGACCTGACCCAATCCAAACTGCGCGACTGGTGCGGCCGGCATTTCCTCGGCTTCCTGCGCATGCGCGAATGGCGCGAACTGCACCGCCAGCTGCGCCTGCTGTGCGAGGAGCTGGGCTGGGACAGCAGCAGCGATGGCGCCTTCGGCACGGCGCTGCTTGCCGCGCCGGCCGCGCTGCCGGCAGGCGGCGATGGCGAAGCCAGGCGCAAGGCCACGCGCGGCGAACTGCACAAGGCGGCGCGGCTGGCACGCGAAGGCGCGAAGCCGGCGCAATCGGTGACCGGGCCGGATGTCCCGGGGTCCGGCGCAGCCGCCCGGCCAGGCAAGGCAAAAACCGACTCCGCCCCCGGTTCCGCCGCGGTACCGGAGAAGGTGCGGGTGGCGGCCTACCAGGCGCTGCACCGGGCGATCCTCGCCGGGCTGCCGACGCAGATCGGCCACCGTACCGAGAAGGGCGACTTCCAGGCGCCGCGCCAGCGCCGCTTCCACCTGTTCCCGGGCTCGGCGCTGGCCAGGCGGCCGCCGCCGTGGGTGCTGAGCGCGACCCTGCTCGATACCCAGCGCGTATGGGGCCTGACCAATGCCGCCATCGAGCCGGACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAGCCGGTGCATTACGGCCGCATCAACCCGGGCGAAGCGCACGACATCTTCGTGCGGCAGGCGCTGGTCACCGGTGAGATCAACACCCGTGCCGGCTTCGTCGCCGACAACCTCAAGGTGCTGGAGCAGGCGCGCGAGGAGGAAGCCAAGCTGCGCCGCGCCGGCATCGTCGCCGACGAGGACTGGCAGGCGCGCTGGTACCTGGGCCGCATTCCGGCCGATATCCATTCGGCCAGTGGGCTGGATGCCTGGTGGAAGGCGTTGCCGCCCGGGCAGCAGCGCACGCTGCGCTGGTCGCTGA
PROTEIN sequence
Length: 895
MSAIEKDTAARLREARTAIDGAMSRDRGRLLGLWSRWQGRPADAAAEAAFRGLLEQSRGQRRRRAAQPVAISMDDALPIAREAERITALIRDHQVVVIAGETGSGKTTQLPKLCLAAGRGEAGMIGCTQPRRIAARAVATRVAEELGSELGTVVGYQVRFTDKVGEDSRIKFMTDGILLAEIASDRWLSRYDTLIIDEAHERSLNIDFLLGYLKQLLRRRPDLKLVVTSATIDTERFSRHFDDAPVVSVEGRTYPVEVRYRPLDEARPAPVAEGRGGGRGRGDDADSDPVSVNDAIVAAVDEITRLDPRGDVLVFLPGEREIRDAHQALERRKYRETEVLPLYARLSAKDQDRVFNPGPKRRLVLTTNVAETSLTVPRIRYVVDPGYARVKRYSPRQKLDRLHIEPVSQASANQRKGRCGRIAEGVCYRLYAEADFQARPEFTDPEIRRSSLAGVILRMLQLGLGRIEDFPFLEPPDERAVADGWQQLAELGAIDGERKLTAIGRQMARLPVDVKLARMLVAAQKAGCLHEMLVIASFLGIQDPRERPPEAREAADNAHAAFADPRSEFLGILRLWEGYRAAHEDLTQSKLRDWCGRHFLGFLRMREWRELHRQLRLLCEELGWDSSSDGAFGTALLAAPAALPAGGDGEARRKATRGELHKAARLAREGAKPAQSVTGPDVPGSGAAARPGKAKTDSAPGSAAVPEKVRVAAYQALHRAILAGLPTQIGHRTEKGDFQAPRQRRFHLFPGSALARRPPPWVLSATLLDTQRVWGLTNAAIEPDXXXXXXXXXXXSRCITAASTRAKRTTSSCGRRWSPVRSTPVPASSPTTSRCWSRRARRKPSCAAPASSPTRTGRRAGTWAAFRPISIRPVGWMPGGRRCRPGSSARCAGR*