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SCNpilot_cont_500_bf_scaffold_10865_6

Organism: SCNPILOT_EXPT_300_BF_Stenotrophomonas_69_97

partial RP 32 / 55 MC: 2 BSCG 34 / 51 MC: 5 ASCG 10 / 38 MC: 1
Location: 4417..4818

Top 3 Functional Annotations

Value Algorithm Source
rne; ribonuclease E (EC:3.1.4.-); K08300 ribonuclease E [EC:3.1.26.12] similarity KEGG
DB: KEGG
  • Identity: 97.5
  • Coverage: 121.0
  • Bit_score: 233
  • Evalue 3.80e-59
Ribonuclease E n=1 Tax=Xanthomonas translucens DAR61454 RepID=L7HBG7_XANCT similarity UNIREF
DB: UNIREF100
  • Identity: 97.5
  • Coverage: 121.0
  • Bit_score: 233
  • Evalue 1.20e-58
Tax=RIFOXYA1_FULL_Xanthomonadales_68_6_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 96.3
  • Coverage: 134.0
  • Bit_score: 255
  • Evalue 3.20e-65

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Taxonomy

RIFOXYA1_FULL_Xanthomonadales_68_6_curated → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 402
ATGGCGTTCCGCGCGGTAGCAGCGCGCGAGGAACGCACAATGAAGCGAATGCTGATCAATGCCACGCAGGCCGAAGAGCTGCGCGTGGCCATCGTGGACGGCCAGACCCTGTACGACATCGACATCGAACAGCCGTCCAAGGAACAGAAGAAGTCCAACATCTACAAGGGCCGCATCACCCGGCTCGAACCCTCCCTCGAAGCGGCTTTCGTCGAATACGGCGGTGACAAGCATGGCTTCCTGCCGCTGAAGGAAATCTCCCGCGATTACTTCCAGGCCGGTGTCGACCACAACAAGGCCGGCATCCGCGAGCTGTTGCGCGAGGGCCAGGAAGTCGTGGTCCAGGTCGACAAGGAGGAGCGCGGCAACAAGGGCGCCGCCCTGACCACGTTCATCTCCCTG
PROTEIN sequence
Length: 134
MAFRAVAAREERTMKRMLINATQAEELRVAIVDGQTLYDIDIEQPSKEQKKSNIYKGRITRLEPSLEAAFVEYGGDKHGFLPLKEISRDYFQAGVDHNKAGIRELLREGQEVVVQVDKEERGNKGAALTTFISL