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SCNpilot_cont_500_bf_scaffold_14158_2

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_63_7

partial RP 38 / 55 MC: 2 BSCG 37 / 51 MC: 3 ASCG 10 / 38 MC: 2
Location: comp(1762..3126)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Aureimonas ureilytica RepID=UPI0003817D21 similarity UNIREF
DB: UNIREF100
  • Identity: 39.9
  • Coverage: 451.0
  • Bit_score: 325
  • Evalue 7.80e-86
Type VI secretion protein IcmF {ECO:0000313|EMBL:EYR83994.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.8
  • Coverage: 457.0
  • Bit_score: 535
  • Evalue 9.10e-149
type VI secretion protein IcmF similarity KEGG
DB: KEGG
  • Identity: 31.3
  • Coverage: 476.0
  • Bit_score: 228
  • Evalue 5.40e-57

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1365
ATGCGCGAGGTCGCGGCGACGGCGGCGCGCCATCTCGCCGACGATCTCTGGGTGATGGGCGACGACGCGCCGCTCGGCGAGCGCGACAGCGCCCGCATCCGCGACGGCATCCTCGATCTCTACCGCGTCGACTACATCAACAAATGGTCGTCCTTGCTCGCCGATATCGGCCCGGCCGGTGCCGACCGCGCCGTCGATGTCGCCCATTCCATCGCCATCATCACCGGCAATCCCTCGCCGCTCAAGGAACTGCTGATCGCCATCGCCGCCGAGACGGATCTGGAGGCGGCGACGACCGTCGTCCTCGACGCCGCCGTCGGCGCGACCACGGCGCGCATCAAATCCGTGACCGGCTCGGCCTACCAGCCGCGCCGCAGCGTCGACGTCGCCAAGTCGGTTTCCGAATATTTCCGCGCCTTCCGCAATGCGGTGACGGCGCCGGAGGGGCAGCAGGCGCCGGCCGACGCCATGCTGGCGGCGATGCAGCCGCTCTATCGCATGCTCAACCACGTCGCCAATGGCGGCGACGTGCTGGAACTCGGCACCGAGCCGCAGACGCTGCTGAAGGATCTCGCCAGCCGCAACGACAACCTGCCGCCGGTGCTACAGCCGGTCTTTGCCCGCATCCTCGCGCAGGTGGCGGCGATCACCGGCGGCAGCTCGCGCGAGCGGCTGGCGCAGATCTGGAATACGACGGTGCTGCCGCTCTGCGATGCGACGATGACGGCGCGTTATCCCTTCGACCGCACCGCCGCCAACGACACGTCGCTGGAGGATTTCGCAAAACTGTTCGGCCCCAAGGGCGCCATCGCCGGTTTCCACAACGATTACCTGAAGCCGTTCATCGACACGACCACCCATCCCTGGCGCTGGCGGCCGGGCCAGCAGGTGGGACTCGGCTTCGACGACGCGACGCTGGCGGCCCTCGAACGCGCCAATGCCATCACCACGATGTTCTTCTCCGACCAGGAGAAGCCGAACCTCGATTTCATGATCACGCCTGGCAAGCTGGACGCCAAGGCGCGCGCCTTCGTGCTCGATGCCGGCGGGCAATCCCTGCTCTACAGCCACGGGCCGATCGTCGATACGCCGTTCCAGTGGCCGCCGCAGAACGTATCGGCCGGCGCCAATCTCTCGGTCATGCCGGAGGTGCAGGGCGAGCGCAATCTCATCGCCCGCCAAGGCCCCTGGGCGATCTTCCGCCTGCTCGACAGCTTCCGCATGATGAGCAAGCAGCCGACCGACAGCGTCGATTATCTCGCCCGCGTCGGCAGCCGCCGGGTGCTGCTGCGGGTCACGGCCTCGGCGACGCGCAATCCTTTCGCCAAGAACATCCTCGCGGGCTACGCCTGCCCGCAACTGTAG
PROTEIN sequence
Length: 455
MREVAATAARHLADDLWVMGDDAPLGERDSARIRDGILDLYRVDYINKWSSLLADIGPAGADRAVDVAHSIAIITGNPSPLKELLIAIAAETDLEAATTVVLDAAVGATTARIKSVTGSAYQPRRSVDVAKSVSEYFRAFRNAVTAPEGQQAPADAMLAAMQPLYRMLNHVANGGDVLELGTEPQTLLKDLASRNDNLPPVLQPVFARILAQVAAITGGSSRERLAQIWNTTVLPLCDATMTARYPFDRTAANDTSLEDFAKLFGPKGAIAGFHNDYLKPFIDTTTHPWRWRPGQQVGLGFDDATLAALERANAITTMFFSDQEKPNLDFMITPGKLDAKARAFVLDAGGQSLLYSHGPIVDTPFQWPPQNVSAGANLSVMPEVQGERNLIARQGPWAIFRLLDSFRMMSKQPTDSVDYLARVGSRRVLLRVTASATRNPFAKNILAGYACPQL*