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SCNpilot_expt_500_p_scaffold_61_9

Organism: SCNPILOT_EXPT_750_P_Variovorax_66_42

near complete RP 51 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 5367..6785

Top 3 Functional Annotations

Value Algorithm Source
Putative efflux protein, MATE family n=1 Tax=Variovorax sp. CF313 RepID=J3CXM3_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 92.2
  • Coverage: 472.0
  • Bit_score: 835
  • Evalue 2.40e-239
  • rbh
Putative efflux protein, MATE family {ECO:0000313|EMBL:EJL80356.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.2
  • Coverage: 472.0
  • Bit_score: 835
  • Evalue 3.40e-239
mate efflux family protein similarity KEGG
DB: KEGG
  • Identity: 91.5
  • Coverage: 472.0
  • Bit_score: 832
  • Evalue 6.50e-239
  • rbh

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1419
ATGAGAGCACCCCCTGAAGCACCCGGCACCACGGGCCCCAGCGGCATGAAGGGCGTGCCTGTCGCGCCCGTCGGCGCCGCGCGTCCGCTGTGGAAGGTCTTCCTCCTGTTCCTTGCGCCGATGCTGCTCAGCAACATCCTGCAATCGCTCTCAGGCACGCTCAACAACATCTACGTCGGGCAGATGCTGGGCGTGGGCGCGCTGGCGGCGGTGTCGAGCTTCTTTCCGGTGATGTTCTTCTTCATCGCCTTCATCATCGGCCTGGGTGCCGGCGCCTCGGTGCTCATAGGCCAGGCCTGGGGCGCGCGCGATGCCGCCAAGGCCAAGGCCGTGGCAGGCACCACGCTCACCGTGGGCGTGCTCACGGGCCTCGTCATCGCGGTGTTCGGCGGCGCGTTCACCACGCCGATGCTGGCTTCGCTCGGCACGCCGCCCGATGTGCTGGCCGACTCCACGCGCTACGCCCGCATCATGCTGATCGCGATGCCGGGTCTCTTCGTGTTCCTGCTGGCCACCGCCATGCTGCGCGGCGTGGGCGACACCGTCACGCCGCTGCTCACGCTGATGATCTCCACGCTGATCGGGCTGGTGGTCACGCCCGCGCTCATCCGCGGCTGGGGCGGCCTGCCGCAGCTGGGCGTGGCGAGCGGCGCCTGGGCCTCGGTGCTGTCGTTCACGGTGGCGACCATCTGGCTGGGCTTCCGGCTGCGCCAGCGCAAGAGCCCGCTCGCGCCCGACGCGGAGTTCATGCGCAACCTGCGCATCCAGCCGCAACTGCTCAAGGCGGTGCTCAAGATCGGCGTGCCCACGGGCGTGCAGATGATCGTGGTCGCGCTGGCCGAAGTGGTGCTGCTGTCGATGGTCAACAGCTACGGCTCCAGCGCCACGGCCGCGTACGGCGCGGTGAACCAGGTGGTGGCGTACGTGCAGTTCCCGGCCATCTCGATCGCCATCACCGCGTCGATCCTCGGCGCGCAGGCCATCGGCGCCGGCCGAGCCAACCGGCTGGGCGCCATCGCCAAGACCGCGCTGCTCATGAACGTGGTGCTGACCGGCGGCCTGGTGGTGCTGGGCTACCTGTTCTCGCGCCATCTCATGGCGTTCTTCATCACGAGCGAGCCGGTGCTCGAGATCGCACAGACGCTGCTGCACATCATGCTGTGGAGCCTGGTGATCTTCGGCATGGCTTCGGCGCTGTCGGGGATCATGCGGGCCAGCGGCTCGGTGCTGGTGCCGACGCTGATCTCCATCGTCTGCATCCTGGGCGTGGAAGTGCCGGTGGCGTATGCCATGAGCCATCGCCTCGGGCTGGACGGCATCTGGATCGCCTACCCGGTGACATTCGGCGCGATGCTGCTGCTGCAGACCGCGTACTACCAGCTGGTGTGGCGCAAGAAGGCGATCCACCGGCTGGTGTAG
PROTEIN sequence
Length: 473
MRAPPEAPGTTGPSGMKGVPVAPVGAARPLWKVFLLFLAPMLLSNILQSLSGTLNNIYVGQMLGVGALAAVSSFFPVMFFFIAFIIGLGAGASVLIGQAWGARDAAKAKAVAGTTLTVGVLTGLVIAVFGGAFTTPMLASLGTPPDVLADSTRYARIMLIAMPGLFVFLLATAMLRGVGDTVTPLLTLMISTLIGLVVTPALIRGWGGLPQLGVASGAWASVLSFTVATIWLGFRLRQRKSPLAPDAEFMRNLRIQPQLLKAVLKIGVPTGVQMIVVALAEVVLLSMVNSYGSSATAAYGAVNQVVAYVQFPAISIAITASILGAQAIGAGRANRLGAIAKTALLMNVVLTGGLVVLGYLFSRHLMAFFITSEPVLEIAQTLLHIMLWSLVIFGMASALSGIMRASGSVLVPTLISIVCILGVEVPVAYAMSHRLGLDGIWIAYPVTFGAMLLLQTAYYQLVWRKKAIHRLV*