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SCNpilot_expt_500_p_scaffold_117_22

Organism: SCNPILOT_EXPT_750_P_Variovorax_66_42

near complete RP 51 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(21030..22220)

Top 3 Functional Annotations

Value Algorithm Source
urea ABC transporter permease n=1 Tax=Variovorax paradoxus RepID=UPI00036F49C1 similarity UNIREF
DB: UNIREF100
  • Identity: 95.5
  • Coverage: 399.0
  • Bit_score: 751
  • Evalue 3.90e-214
  • rbh
urea ABC transporter permease; K01998 branched-chain amino acid transport system permease protein similarity KEGG
DB: KEGG
  • Identity: 94.5
  • Coverage: 400.0
  • Bit_score: 749
  • Evalue 6.00e-214
  • rbh
Urea ABC transporter, permease protein UrtC {ECO:0000313|EMBL:ACS19762.1}; Flags: Precursor;; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.5
  • Coverage: 400.0
  • Bit_score: 749
  • Evalue 2.70e-213

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1191
ATGAATTTCATCAAGGCCTCGATCCAGCGCTACCAGCTCGGCAGCCTGCTGCTCCTGGTGCTGCTGCTCGCGGTGGTGCTGCCGCTGTCGCTCGACATCTTCCGCCTCAACCTCGTGGGCAAGTACCTCACCTACGCCTTCGTGGCCGTGGGGCTCGTCATGGTGTGGGGCTACGGCGGCGTGCTCAGCCTGGGGCAGGGCGTGTTCTTCGGCATCGGCGGGTATGCGATGGCGATGTTCCTCAAGCTCGAAGCCTCCGACCCCGTCACGACCAAGATCCAGTCGACGCCGGGCATTCCGGACTTCATGGACTGGAACCAGATCACCGAGCTGCCCGCGCTGTGGCTGCCCTTCAAGAGCCTGCCGCTGAGCCTGGCGCTGGTGGTGCTGGCACCGATGGCGCTGGCCTGGCTCGTGAGCTTCGCGATGTTCAAGCGACGCGTGGGCGGCGTTTACTTCGCGATCATCACGCAGGCGGTGGCGCTCATCTGCACCGTGCTCATCATCGGCCAGCAGGGCTACACCGGCGGCGTCAACGGCATGACCGACCTGAAGACACTGCTGGGCTGGGACACGCGCACCGACGGCGCCAAGTACGTGCTGTATTACGTCTGCGTCGGCCTGCTGGTGCTGAGCATCCTGCTGTGCCGCTGGATCCAGACCAGCAAGCTGGGCACGCTGCTGCTGGCCATGCGCGACAAGGAAGACCGCGTGCGCTTCTCCGGCTACGACGTGTCGAACTTCAAGGTCTTCATCTTCTGCCTGGCGGCCGGGCTCTCGGGCATCGGCGGCGCGATGTTCGCGCTGCAGGTGGGCTTCATGTCGCCGAGCTTCGTGGGCATCGTGCCCTCCATCGAAATGGTGATCTTCTGCGCCGTCGGCGGCCGCATGAGCCTGGTGGGCGCGGTGTACGGCGCGCTGCTGGTGAACGCGGGCAAGACGCTGTTCTCCGAAAGCTTCCCGGACCTGTGGCTGTTCCTGATGGCGGGCCTGTTCATCGGCGTGACCATGGCCTTCCCGATGGGGCTGGCCGGCGTATGGGAAGAAAAGATCCGCCCGTGGTGGAAGTCGCGGCGGCAGGCGCTGCGCGAAGCGGCCGTCAAGCCGCCGGCAACACCAACAGCAGCACAACCAGCCGCACAGCCACCCGAACCCACGCTGCCCGAAGGCGTAGGCAGCCAGCGCGCCTGA
PROTEIN sequence
Length: 397
MNFIKASIQRYQLGSLLLLVLLLAVVLPLSLDIFRLNLVGKYLTYAFVAVGLVMVWGYGGVLSLGQGVFFGIGGYAMAMFLKLEASDPVTTKIQSTPGIPDFMDWNQITELPALWLPFKSLPLSLALVVLAPMALAWLVSFAMFKRRVGGVYFAIITQAVALICTVLIIGQQGYTGGVNGMTDLKTLLGWDTRTDGAKYVLYYVCVGLLVLSILLCRWIQTSKLGTLLLAMRDKEDRVRFSGYDVSNFKVFIFCLAAGLSGIGGAMFALQVGFMSPSFVGIVPSIEMVIFCAVGGRMSLVGAVYGALLVNAGKTLFSESFPDLWLFLMAGLFIGVTMAFPMGLAGVWEEKIRPWWKSRRQALREAAVKPPATPTAAQPAAQPPEPTLPEGVGSQRA*