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SCNpilot_cont_500_bf_scaffold_235

Search features with annotation key words

Displaying items 301-330 of 335 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_235_300
Mesorhizobium sp. LSHC422A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

316269..317141
DNA (873bp) protein (291aa)
UPI0003CEEAB8 related cluster n=1 Tax=unknown RepID=UPI0003CEEAB8 rbh
Cytochrome C oxidase subunit I {ECO:0000313|EMBL:ESX52752.1}; TaxID=1287294 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC422A00.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_235_301
Hoeflea sp. BAL378, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(317308..317979)
DNA (672bp) protein (224aa)
DSBA oxidoreductase n=1 Tax=Hoeflea phototrophica DFL-43 RepID=A9CW41_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KGF70334.1}; TaxID=1547437 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. BAL378.;"
nahD; DSBA oxidoreductase
SCNpilot_cont_500_bf_scaffold_235_302
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(318006..319562)
DNA (1557bp) protein (519aa)
Vinylacetyl-CoA Delta-isomerase {ECO:0000313|EMBL:KFC62175.1}; EC=5.3.3.3 {ECO:0000313|EMBL:KFC62175.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
gamma-aminobutyrate metabolism dehydratase/isomerase (EC:4.2.1.- 5.3.3.3); K00483 4-hydroxyphenylacetate-3-monooxygenase large chain [EC:1.14.14.9]
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NJ98_AFIFE
SCNpilot_cont_500_bf_scaffold_235_303
Microvirga aerilata, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

319650..320186
DNA (537bp) protein (179aa)
Isochorismatase n=1 Tax=Rhodovulum sp. PH10 RepID=J6LA51_9RHOB
Isochorismatase {ECO:0000313|EMBL:KFG70578.1}; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilata.;"
isochorismatase hydrolase
SCNpilot_cont_500_bf_scaffold_235_304
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

320294..322345
DNA (2052bp) protein (684aa)
Short chain dehydrogenase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HRR7_9RHIZ
Short chain dehydrogenase {ECO:0000313|EMBL:EHK56580.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
class II aldolase/adducin family protein
SCNpilot_cont_500_bf_scaffold_235_305
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

322508..323776
DNA (1269bp) protein (423aa)
Methylthioribose kinase {ECO:0000256|HAMAP-Rule:MF_01683}; Short=MTR kinase {ECO:0000256|HAMAP-Rule:MF_01683};; EC=2.7.1.100 {ECO:0000256|HAMAP-Rule:MF_01683};; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
5-methylthioribose kinase (EC:2.7.1.100); K00899 5-methylthioribose kinase [EC:2.7.1.100]
Methylthioribose kinase n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5F7L3_9RHIZ
SCNpilot_cont_500_bf_scaffold_235_306
Ochrobactrum anthropi, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

323849..324964
DNA (1116bp) protein (372aa)
mtnA; methylthioribose-1-phosphate isomerase; K08963 methylthioribose-1-phosphate isomerase [EC:5.3.1.23] rbh
Methylthioribose-1-phosphate isomerase {ECO:0000255|HAMAP-Rule:MF_01678}; Short=M1Pi {ECO:0000255|HAMAP-Rule:MF_01678};; Short=MTR-1-P isomerase {ECO:0000255|HAMAP-Rule:MF_01678};; EC=5.3.1.23 {ECO:0000255|HAMAP-Rule:MF_01678};; S-methyl-5-thioribose-1-phosphate isomerase {ECO:0000255|HAMAP-Rule:MF_01678}; TaxID=439375 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168).;"
Methylthioribose-1-phosphate isomerase n=1 Tax=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) RepID=MTNA_OCHA4 rbh
SCNpilot_cont_500_bf_scaffold_235_307
Aurantimonas manganoxydans, Aurantimonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(325015..325596)
DNA (582bp) protein (194aa)
Conserved hypothetical membrane protein n=1 Tax=Manganese-oxidizing bacterium (strain SI85-9A1) RepID=Q1YES7_MOBAS
Conserved hypothetical membrane protein {ECO:0000313|EMBL:EAS48818.1}; TaxID=287752 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Aurantimonas.;" source="Manganese-oxidizing bacterium (strain SI85-9A1).;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_235_308
unknown

Not on your lists

325829..326056
DNA (228bp) protein (76aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_235_309
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

326209..326712
DNA (504bp) protein (168aa)
Uncharacterized protein n=3 Tax=Oligotropha carboxidovorans RepID=B6JBF3_OLICO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI07311.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
SCNpilot_cont_500_bf_scaffold_235_310
RIFOXYD2_FULL_Proteobacteria_50_16_curated, Proteobacteria, Bacteria

Not on your lists

326846..327409
DNA (564bp) protein (188aa)
TetR family transcriptional regulator n=1 Tax=Paenibacillus sp. JC66 RepID=UPI000288ADFF
TetR family transcriptional regulator
Tax=RIFOXYD2_FULL_Proteobacteria_50_16_curated
SCNpilot_cont_500_bf_scaffold_235_311
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

327406..328587
DNA (1182bp) protein (394aa)
hypothetical protein n=1 Tax=Methylosarcina fibrata RepID=UPI00037FA1C0 rbh
Monooxygenase FAD-binding {ECO:0000313|EMBL:EDY22312.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_235_312
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(328715..329698)
DNA (984bp) protein (328aa)
membrane protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002E34E80 rbh
Rubrerythrin {ECO:0000313|EMBL:EHK58878.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_235_313
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

329983..330987
DNA (1005bp) protein (335aa)
Catabolic threonine dehydratase, PLP-dependent {ECO:0000313|EMBL:CDX37621.1}; EC=4.3.1.19 {ECO:0000313|EMBL:CDX37621.1};; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
Pyridoxal-5'-phosphate-dependent protein beta subunit; K01754 threonine dehydratase [EC:4.3.1.19] rbh
UPI0003CE9B13 related cluster n=1 Tax=unknown RepID=UPI0003CE9B13
SCNpilot_cont_500_bf_scaffold_235_314
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(331257..332057)
DNA (801bp) protein (267aa)
UPI0003CE5E36 related cluster n=1 Tax=unknown RepID=UPI0003CE5E36
Anti-sigma factor {ECO:0000313|EMBL:ESW81033.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_235_315
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(332044..332610)
DNA (567bp) protein (189aa)
UPI0003CDEAC8 related cluster n=1 Tax=unknown RepID=UPI0003CDEAC8
RNA polymerase sigma factor {ECO:0000313|EMBL:ESW81034.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily
SCNpilot_cont_500_bf_scaffold_235_316
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(332637..332981)
DNA (345bp) protein (115aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI0003622D8D
Amicyanin {ECO:0000313|EMBL:ESW81035.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
putative copper binding protein
SCNpilot_cont_500_bf_scaffold_235_317
Mesorhizobium sp. LNHC252B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(333005..333949)
DNA (945bp) protein (315aa)
UPI0003CE015E related cluster n=1 Tax=unknown RepID=UPI0003CE015E
Metallophosphoesterase {ECO:0000313|EMBL:ESY75432.1}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC252B00.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_235_318
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(334050..335180)
DNA (1131bp) protein (377aa)
ABC transporter n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HK61_9RHIZ
ABC transporter {ECO:0000313|EMBL:EHK58876.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
ABC-type multidrug transport system, permease component
SCNpilot_cont_500_bf_scaffold_235_319
unknown

Not on your lists

comp(335177..335347)
DNA (171bp) protein (57aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_235_320
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(335344..336303)
DNA (960bp) protein (320aa)
UPI0003CE0570 related cluster n=1 Tax=unknown RepID=UPI0003CE0570 rbh
Multidrug ABC transporter ATP-binding protein {ECO:0000313|EMBL:ESW79864.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
ABC transporter rbh
SCNpilot_cont_500_bf_scaffold_235_321
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(336290..337243)
DNA (954bp) protein (318aa)
UPI0003CEE65A related cluster n=1 Tax=unknown RepID=UPI0003CEE65A
Secretion protein HlyD family protein {ECO:0000313|EMBL:CDX13974.1}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
multidrug resistance efflux pump
SCNpilot_cont_500_bf_scaffold_235_322
Mesorhizobium opportunistum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(337240..337902)
DNA (663bp) protein (221aa)
Transcriptional regulator, TetR family n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7Y908_MESOW
TetR family transcriptional regulator
Transcriptional regulator, TetR family {ECO:0000313|EMBL:AEH85318.1}; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075).;"
SCNpilot_cont_500_bf_scaffold_235_323
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

338068..338559
DNA (492bp) protein (164aa)
Adenylate cyclase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HK57_9RHIZ
Adenylate cyclase {ECO:0000313|EMBL:EHK58872.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
adenylate cyclase
SCNpilot_cont_500_bf_scaffold_235_324
Phyllobacterium sp. YR531, Phyllobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

338658..338972
DNA (315bp) protein (105aa)
Putative integral membrane protein n=1 Tax=Phyllobacterium sp. YR531 RepID=J2VB26_9RHIZ
Putative integral membrane protein {ECO:0000313|EMBL:EJN03112.1}; Flags: Precursor;; TaxID=1144343 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Phyllobacterium.;" source="Phyllobacterium sp. YR531.;"
transmembrane signal peptide protein
SCNpilot_cont_500_bf_scaffold_235_325
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(339033..339992)
DNA (960bp) protein (320aa)
Pantothenate kinase {ECO:0000256|HAMAP-Rule:MF_00215, ECO:0000256|RuleBase:RU003530}; EC=2.7.1.33 {ECO:0000256|HAMAP-Rule:MF_00215, ECO:0000256|RuleBase:RU003530};; Pantothenic acid kinase {ECO:0000256|HAMAP-Rule:MF_00215}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
Pantothenate kinase n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2ME05_9RHIZ rbh
pantothenate kinase, bacterial type rbh
SCNpilot_cont_500_bf_scaffold_235_326
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(340001..340327)
DNA (327bp) protein (109aa)
Phosphoribosyl-ATP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01020, ECO:0000256|SAAS:SAAS00071052}; Short=PRA-PH {ECO:0000256|HAMAP-Rule:MF_01020};; EC=3.6.1.31 {ECO:0000256|HAMAP-Rule:MF_01020, ECO:0000256|SAAS:SAAS00071044};; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
phosphoribosyl-ATP diphosphatase (EC:3.6.1.31); K01523 phosphoribosyl-ATP pyrophosphohydrolase [EC:3.6.1.31]
Phosphoribosyl-ATP pyrophosphatase n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y793_9RHIZ
SCNpilot_cont_500_bf_scaffold_235_327
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(340346..341128)
DNA (783bp) protein (261aa)
Imidazole glycerol phosphate synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; EC=4.1.3.- {ECO:0000256|HAMAP-Rule:MF_01013};; IGP synthase cyclase subunit {ECO:0000256|HAMAP-Rule:MF_01013}; IGP synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; ImGP synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
imidazole glycerol phosphate synthase subunit HisF; K02500 cyclase [EC:4.1.3.-]
Imidazole glycerol phosphate synthase subunit HisF n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2MNZ6_9RHIZ
SCNpilot_cont_500_bf_scaffold_235_328
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(341125..341238)
DNA (114bp) protein (38aa)
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D3Z3_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EYR78910.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
SCNpilot_cont_500_bf_scaffold_235_329
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(341235..341348)
DNA (114bp) protein (38aa)
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D3Z3_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EYR78910.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
Displaying items 301-330 of 335 in total

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