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04302015_21_UNK

In projects: 04302015_21
Displaying items 101-150 of 29871 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
04302015_21_scaffold_1346
Species: Acidocella aminolytica (85.71%)
7 5570 bp 57.22 64.42 71.20
04302015_21_scaffold_5594 3 2717 bp 67.65 64.37 92.09
04302015_21_scaffold_27451
Species: Rhizobium mesoamericanum (50%)
2 1208 bp 65.31 64.20 99.59
04302015_21_scaffold_27301
Order: Rhodospirillales (80%)
5 3295 bp 70.77 63.82 88.13
04302015_21_scaffold_1163
Domain: Bacteria (55.56%)
9 6734 bp 62.74 63.68 80.81
04302015_21_scaffold_17629
Species: Gimesia maris (100%)
1 1534 bp 61.47 63.36 90.35
04302015_21_scaffold_9776
Species: R_OD1_Kaiserbacteria_56_24 (50%)
2 2066 bp 68.10 63.31 89.30
04302015_21_scaffold_22336
Species: Nitrospirillum amazonense (50%)
4 2329 bp 66.64 63.05 100.47
04302015_21_scaffold_615 9 8830 bp 57.50 62.97 100.06
04302015_21_scaffold_10672 3 1979 bp 45.48 62.68 62.91
04302015_21_scaffold_17732
Species: Acidocella sp. MX-AZ02 (100%)
1 1529 bp 70.24 61.51 99.87
04302015_21_scaffold_2405
Genus: Bradyrhizobium (75%)
4 4056 bp 62.80 61.50 93.64
04302015_21_scaffold_2078
Phylum: Proteobacteria (50%)
8 5504 bp 59.50 61.46 94.73
04302015_21_scaffold_4366
Species: Methyloceanibacter caenitepidi (60%)
5 3608 bp 58.98 60.82 100.86
04302015_21_scaffold_9667
Class: Gammaproteobacteria (100%)
3 2078 bp 69.15 60.42 100.34
04302015_21_scaffold_15270
Phylum: Proteobacteria (50%)
4 2841 bp 53.47 60.30 85.64
04302015_21_scaffold_43752
Species: Jannaschia aquimarina (50%)
2 1558 bp 75.03 59.40 63.16
04302015_21_scaffold_19676
Species: Sphingomonas sp. LH128 (66.67%)
3 1446 bp 61.07 59.34 91.91
04302015_21_scaffold_39184 4 1485 bp 59.12 58.69 82.02
04302015_21_scaffold_10107
Species: Acidocella sp. MX-AZ02 (100%)
1 2036 bp 65.91 58.50 99.90
04302015_21_scaffold_7578
Order: Rhodospirillales (100%)
3 2336 bp 73.42 57.86 95.93
04302015_21_scaffold_2076
Class: Deltaproteobacteria (57.14%)
7 4371 bp 49.10 57.86 95.81
04302015_21_scaffold_29729
Species: alpha proteobacterium Q-1 (50%)
2 1157 bp 67.24 57.82 80.64
04302015_21_scaffold_8714 5 2188 bp 49.09 57.72 94.06
04302015_21_scaffold_13146
Species: Polymorphum gilvum (50%)
2 1786 bp 63.61 57.61 83.48
04302015_21_scaffold_20487
Species: Acidocella aminolytica (100%)
1 2139 bp 70.08 57.57 100.00
04302015_21_scaffold_6162
Class: Betaproteobacteria (50%)
4 2900 bp 60.90 57.47 75.97
04302015_21_scaffold_31674
Species: Roseomonas cervicalis (100%)
2 1116 bp 68.91 57.39 100.27
04302015_21_scaffold_16262
Class: Alphaproteobacteria (100%)
3 1601 bp 65.40 57.34 94.07
04302015_21_scaffold_9485
Species: RIFOXYC1_FULL_RIF_OD1_09_52_10_curated (100%)
1 2099 bp 60.93 57.24 99.90
04302015_21_scaffold_19137 4 1467 bp 64.35 56.44 99.59
04302015_21_scaffold_30394 3 1143 bp 59.76 56.43 100.52
04302015_21_scaffold_29936
Order: Rhodospirillales (50%)
4 2434 bp 62.49 56.33 91.58
04302015_21_scaffold_25747 2 1694 bp 63.64 56.32 103.25
04302015_21_scaffold_24177
Species: Dinoroseobacter shibae (50%)
2 1293 bp 70.30 55.92 96.06
04302015_21_scaffold_29371
Species: Acidocella aminolytica (100%)
1 1164 bp 65.46 55.80 100.00
04302015_21_scaffold_20790 5 2005 bp 63.74 55.06 100.70
04302015_21_scaffold_59117
Species: [Clostridium] leptum (100%)
1 1339 bp 52.13 54.33 16.36
04302015_21_scaffold_35998
Species: Sodalis glossinidius (50%)
2 1039 bp 53.80 53.99 99.90
04302015_21_scaffold_23772
Species: Acidocella aminolytica (50%)
2 1305 bp 65.98 53.91 100.23
04302015_21_scaffold_14208
Species: Sphingopyxis sp. MC1 (100%)
2 1718 bp 74.16 53.87 99.19
04302015_21_scaffold_30810 4 1754 bp 53.14 53.79 98.18
04302015_21_scaffold_18501
Species: Thioclava sp. DT23-4 (100%)
1 1493 bp 65.64 53.35 99.87
04302015_21_scaffold_52273
Species: Acidocella aminolytica (50%)
2 1406 bp 63.37 53.24 94.10
04302015_21_scaffold_23556
Species: Neorhizobium galegae (100%)
1 2026 bp 66.58 53.16 99.95
04302015_21_scaffold_12788
Order: Rhodospirillales (100%)
3 1812 bp 58.66 52.90 87.91
04302015_21_scaffold_15613
Order: Rhodospirillales (71.43%)
7 3656 bp 64.58 52.89 89.77
04302015_21_scaffold_35960
Species: Burkholderia glumae (66.67%)
3 1040 bp 54.13 52.64 99.52
04302015_21_scaffold_21183
Species: Sphingomonas sp. MM-1 (50%)
2 1389 bp 58.68 52.59 83.80
04302015_21_scaffold_32274
Species: Acidisphaera rubrifaciens (50%)
2 1104 bp 67.39 52.31 100.27
Displaying items 101-150 of 29871 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.