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SCNpilot_expt_1000_bf_scaffold_1270_curated_29

Organism: scnpilot_dereplicated_Burkholderiales_4

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 13412..14401

Top 3 Functional Annotations

Value Algorithm Source
rpoA; DNA-directed RNA polymerase subunit alpha; K03040 DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] similarity KEGG
DB: KEGG
  • Identity: 80.3
  • Coverage: 330.0
  • Bit_score: 521
  • Evalue 1.70e-145
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; TaxID=1031711 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia solanacearum (strain Po82).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.3
  • Coverage: 330.0
  • Bit_score: 521
  • Evalue 7.60e-145
DNA-directed RNA polymerase subunit alpha n=1 Tax=Ralstonia solanacearum (strain Po82) RepID=F6FXS3_RALS8 similarity UNIREF
DB: UNIREF100
  • Identity: 80.3
  • Coverage: 330.0
  • Bit_score: 521
  • Evalue 5.40e-145

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Taxonomy

Ralstonia solanacearum → Ralstonia → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 990
ATGCAGACTGCCATGCTGAAGCCGCGCATCGTCGAGGTGGAGCAACTCGGTGCCTCGCATGCCCGTGTGGTGATGGAGCCGTTCGAGCGCGGCTACGGTCACACGCTGGGCAACGCGCTGCGCCGCGTCCTGCTGTCCTCGATGGTCGGCTACGCGCCCACCGAAGTGCAGATCACCGGGGTGGTGCACGAGTACTCGACGATCGACGGCGTGCGCGAGGACGTCGTCGACCTCCTGCTGAACCTCAAGGGCGTCACCTTCCGGCTGCACAACCGCGACGAGGTGTTCCTCACCCTGCGCAAGGATACCCCCGGGCCGGTGACGGCTGCCGACATCGACGTGCCGCACGACGTCGAGGTGATCAACCCCGAGCACGTGATCGCCACCCTCACCCAGGGCGGCAAGATCGACATGTCGATCAAGGTCGAGCGCGGCCGCGGCTACCTGCCGGGCACGATGCGCAACTTCAACGAGGCCAAGACCATCGGCAAGATCGTGCTCGATGCGTCGTTCTCGCCGGTGCGCCGCGTGAGCTACCAGGTGGAGAGCGCCCGCGTCGAGCAGCGCACCGACCTCGACCGCCTGGTGGTCGACGTCGAGACCAACGGCGTGATCGCTCCCGAAGAGGCGGTGCGCCAGTCGGCGCGCATCCTGGTCGAGCAGCTCACCGTCTTCGCCGCCCTCGAGGGCGGCGCCGAGCCGGTCGTCCAGCCGGCCGCGGTGGGCGGCGGGCGCGGTCCCCAGATCGATCCGATCCTGATGCGCCCGGTCGACGACCTCGAGCTCACCGTGCGCTCGGCCAACTGCCTGAAGGCCGAGAACATCTACTACATCGGCGACCTGATCCAGCGCACCGAGAACGAGCTGCTCAAGACCCCCAACCTCGGGCGCAAATCGCTCAACGAGATCAAGGAAGTGCTGGCGTCGCGCGGACTGACGCTCGGCATGAAGCTCGAGAACTGGCCGCCGGCCGGCCTCGAGCGTCCATAA
PROTEIN sequence
Length: 330
MQTAMLKPRIVEVEQLGASHARVVMEPFERGYGHTLGNALRRVLLSSMVGYAPTEVQITGVVHEYSTIDGVREDVVDLLLNLKGVTFRLHNRDEVFLTLRKDTPGPVTAADIDVPHDVEVINPEHVIATLTQGGKIDMSIKVERGRGYLPGTMRNFNEAKTIGKIVLDASFSPVRRVSYQVESARVEQRTDLDRLVVDVETNGVIAPEEAVRQSARILVEQLTVFAALEGGAEPVVQPAAVGGGRGPQIDPILMRPVDDLELTVRSANCLKAENIYYIGDLIQRTENELLKTPNLGRKSLNEIKEVLASRGLTLGMKLENWPPAGLERP*