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SCNpilot_expt_500_p_scaffold_4022_curated

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_p_scaffold_4022_curated_1
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(600..1157)
DNA (558bp) protein (186aa)
phosphatidylglycerophosphate synthase; K00995 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase {ECO:0000313|EMBL:AIL12809.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase id=4771423 bin=GWC2_Alphaproteobacteria_42_16 species=Oceanibaculum indicum genus=Oceanibaculum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
SCNpilot_expt_500_p_scaffold_4022_curated_2
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1195..3054)
DNA (1860bp) protein (620aa)
UvrABC system protein C n=1 Tax=uncultured bacterium RepID=K2DUI9_9BACT
UvrABC system protein C {ECO:0000256|HAMAP-Rule:MF_00203, ECO:0000256|SAAS:SAAS00088139}; Short=Protein UvrC {ECO:0000256|HAMAP-Rule:MF_00203};; Excinuclease ABC subunit C {ECO:0000256|HAMAP-Rule:MF_00203}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
uvrC; excinuclease ABC subunit C
SCNpilot_expt_500_p_scaffold_4022_curated_3
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3654..4796
DNA (1143bp) protein (381aa)
Polyamine-transporting ATPase {ECO:0000256|SAAS:SAAS00083160}; EC=3.6.3.31 {ECO:0000256|SAAS:SAAS00083160};; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
spermidine/putrescine transport system ATP-binding protein id=4886487 bin=GWC2_Alphaproteobacteria_42_16 species=Candidatus Odyssella thessalonicensis genus=Candidatus Odyssella taxon_order=Rickettsiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
potG; putrescine ABC transporter, ATP-binding protein
SCNpilot_expt_500_p_scaffold_4022_curated_4
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4840..5754
DNA (915bp) protein (305aa)
Putrescine transport system permease protein PotH n=1 Tax=Caenispirillum salinarum AK4 RepID=K9HQB9_9PROT
Spermidine/putrescine ABC transporter permease {ECO:0000313|EMBL:AIL12917.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
potH; binding-protein dependent transport system inner membrane protein
SCNpilot_expt_500_p_scaffold_4022_curated_5
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5756..6583
DNA (828bp) protein (276aa)
Ornithine carbamoyltransferase (EC:2.1.3.3); K11074 putrescine transport system permease protein
ABC-type transporter, integral membrane subunit n=1 Tax=Thiocapsa marina 5811 RepID=F9UFW6_9GAMM
Spermidine/putrescine ABC transporter permease {ECO:0000313|EMBL:AIL12916.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
SCNpilot_expt_500_p_scaffold_4022_curated_6
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6580..7410
DNA (831bp) protein (277aa)
ATPase n=1 Tax=Candidatus Odyssella thessalonicensis RepID=UPI000225AC10
ATPase {ECO:0000313|EMBL:AIL12915.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
chromosome partitioning protein
SCNpilot_expt_500_p_scaffold_4022_curated_7
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7477..8370
DNA (894bp) protein (298aa)
Redox-sensitive transcriptional activator n=2 Tax=Magnetospirillum gryphiswaldense RepID=A4TY54_9PROT
LysR family transcriptional regulator {ECO:0000313|EMBL:AIL12914.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
transcriptional regulator
Displaying 7 items

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