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SCNpilot_expt_1000_bf_scaffold_301_curated_42

Organism: scnpilot_dereplicated_Devosia_2

near complete RP 53 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: comp(37988..39172)

Top 3 Functional Annotations

Value Algorithm Source
Flp pilus assembly protein RcpC/CpaB n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RFS2_PELHB similarity UNIREF
DB: UNIREF100
  • Identity: 43.0
  • Coverage: 300.0
  • Bit_score: 204
  • Evalue 1.70e-49
Flp pilus assembly protein RcpC/CpaB {ECO:0000313|EMBL:CDP50622.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 50.4
  • Coverage: 258.0
  • Bit_score: 225
  • Evalue 1.80e-55
Flp pilus assembly protein RcpC/CpaB; K02279 pilus assembly protein CpaB similarity KEGG
DB: KEGG
  • Identity: 43.0
  • Coverage: 300.0
  • Bit_score: 204
  • Evalue 5.50e-50

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Taxonomy

Devosia sp. DDB001 → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1185
GTGCTCCGGCGCACGAAAACCATCGTCTTCAACGACGACCCTGACACCGCGATCTATGGCGAGCCCGAACCGTCACCCTCCGCGCGGCGGCCGTTCGAGAGCGTACGCGCGACGTTGCGCAAGGTGCCGCCCGCCGTCCCGGCCTCCGATTCCGAAGCCTTCGAGCCGGCGTCCGCGCCCAACGCCGTGCATGAGCGCATGAACTTCCTTCGCTCCGAATTCGAGAACGAACCCATCAGCCGCGGCTCGCAGGAAAGCCTCGCCGCGCTCCGCGAGGAGTTCCGCCGCAAGCATGTGACCTCCGAGGATGCGCCGGGGCCCGCCTTCGCTTTGCCCTCGCTGGGCGGCTTCAAGGCCTCGCGCCTCATCCTCGTCGCGGTCGCGCTCATCGCCGGCGGTCTCGCCGCCTGGCTCGCGCTCGGCCGCCAGCCCGAACCCGCCCCTGCTCCCGTCATCGAGCAGGCTGCGCCCGTTATCGAGGCGCCCACCATCGACGTGCTCGTCGCGCGGGCGCCCATCGCCGTCGGCACGCGGCTCACCCCTGAGCTGCTCGAATGGCAGAAATGGCCTGAGGCCACCATTCGCACCGAATATCTCACCAGCGCCGCCGCGCCCGAGGCCATGACCGAGCTCGTCGGTGCCGTCGCCCGCAGCGAGCTGCTGGCCGGCGAGCCCATCCGCCGCGAAAAGCTGGGCCAGGCCGGCGCCGGTTACCTCTCGGCCATCCTCGAGCCCGGCATGCGCGCCGTCGCCGTCCCGATCAGCCCGCGCTCCGGTTCGGGCGGCTTCATCATGCCCAATGACCGCGTCGACGTCGTGCTGACCACCGGCAACGATGCCGAACAAAGCTCGCGCACAATCCTCGAAAACGTCCGCGTGCTCGCCATCAACTCCCGCCTTGGCGCCACCCAGACCGAGGCCGCCGCGGCCGATCCGGCCGAGGGCATGTTCGCCGACAATGCGCTCGCCACGCTCGAGCTCGATCCCGCCCAGGCCGAGCTCATCATCAGCGCCGCCAACGGCATGCTGTCGCTCGTGTTGCGCCCCAGTGCCGACGACACCGTCTCGAGCAATGCCGCCGAGCGCGCCGTCAATCAGAACATCCGTCTGACCAGCCCCTTCTGGCTGCAACCGCAGCAACCCGGCTCGAGCGGCACCGCTCCGGCCTATCCCAGTGGAATGTGA
PROTEIN sequence
Length: 395
VLRRTKTIVFNDDPDTAIYGEPEPSPSARRPFESVRATLRKVPPAVPASDSEAFEPASAPNAVHERMNFLRSEFENEPISRGSQESLAALREEFRRKHVTSEDAPGPAFALPSLGGFKASRLILVAVALIAGGLAAWLALGRQPEPAPAPVIEQAAPVIEAPTIDVLVARAPIAVGTRLTPELLEWQKWPEATIRTEYLTSAAAPEAMTELVGAVARSELLAGEPIRREKLGQAGAGYLSAILEPGMRAVAVPISPRSGSGGFIMPNDRVDVVLTTGNDAEQSSRTILENVRVLAINSRLGATQTEAAAADPAEGMFADNALATLELDPAQAELIISAANGMLSLVLRPSADDTVSSNAAERAVNQNIRLTSPFWLQPQQPGSSGTAPAYPSGM*