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scnpilot_p_inoc_scaffold_239_curated_48

Organism: scnpilot_dereplicated_Magnetospirillum_1

near complete RP 52 / 55 BSCG 51 / 51 ASCG 12 / 38
Location: comp(52057..52392)

Top 3 Functional Annotations

Value Algorithm Source
Type IV secretory pathway, VirB2 component (Pilin) n=1 Tax=Sphingobium sp. AP49 RepID=J2WPQ8_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 99.1
  • Coverage: 111.0
  • Bit_score: 211
  • Evalue 4.10e-52
Type IV secretory pathway, VirB2 component (Pilin) {ECO:0000313|EMBL:EJK84235.1}; Flags: Precursor;; TaxID=1144307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. AP49.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.1
  • Coverage: 111.0
  • Bit_score: 211
  • Evalue 5.70e-52
conjugal transfer protein TrbC; K03197 type IV secretion system protein VirB2 similarity KEGG
DB: KEGG
  • Identity: 92.8
  • Coverage: 111.0
  • Bit_score: 200
  • Evalue 3.80e-49

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Taxonomy

Sphingobium sp. AP49 → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 336
ATGATCCATGCCCTTCGGCATGGCGCGCGCCGCGCCATGCTTACCGCCACCGCCAGCGTGATTGCGCTGACCTTCGCCGTTCCGGCCCATGCCGGTGGCTCGTCGATGCCGTGGGAAGCCCCGCTCCAGTCGATCCTCGAAAGCATCGAGGGGCCGGTCGCCAAGATCATCGCCGTCATCATCATCATCGTGACCGGCCTGACGCTGGCCTTCGGCGACACGTCGGGCGGCTCGCGCCGGCTGATCCAGATCGTATTCGGCCTGTCTATCGCGTTCGCCGCGTCGAGCTTCTTCCTGTCGTTCTTCTCGTTCGGCGGTGGAGCGCTGATCGCATGA
PROTEIN sequence
Length: 112
MIHALRHGARRAMLTATASVIALTFAVPAHAGGSSMPWEAPLQSILESIEGPVAKIIAVIIIIVTGLTLAFGDTSGGSRRLIQIVFGLSIAFAASSFFLSFFSFGGGALIA*