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scnpilot_p_inoc_scaffold_239_curated_55

Organism: scnpilot_dereplicated_Magnetospirillum_1

near complete RP 52 / 55 BSCG 51 / 51 ASCG 12 / 38
Location: comp(59262..59807)

Top 3 Functional Annotations

Value Algorithm Source
Conjugal transfer protein TraF n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YNG9_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 85.6
  • Coverage: 180.0
  • Bit_score: 311
  • Evalue 4.70e-82
Type IV secretory pathway, protease TraF {ECO:0000313|EMBL:EZP81819.1}; Flags: Precursor;; TaxID=158500 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium resinovorum.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.1
  • Coverage: 180.0
  • Bit_score: 314
  • Evalue 7.80e-83
conjugal transfer protein TraF similarity KEGG
DB: KEGG
  • Identity: 73.9
  • Coverage: 180.0
  • Bit_score: 275
  • Evalue 1.20e-71

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Taxonomy

Novosphingobium resinovorum → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 546
ATGACGCGCCGGGGCTGGACCATTGCGACGGTCGTTGCCGCATCGCTGTTTGGCGTGTCGTTCGCCGCCGTCTCGGTCTTCGACCCGCTACCGCGCGTCGTATGGAACGCCAGCGCGAGCGCGCCGATCGGGCTCTACCGCATTGTGCCGGAAGGCGATCCGCCGCTCGGCGCACTGGTCGCGGTCACGCCGCCCGCGCCGCTCGCGCGATGGCTGGCGGAGCGCGGCTATCTCGGCGAGCGTGTGCCTCTGTTGAAGCATGTCGCGGCCAAGTCGGGGCAGCGGGTGTGCCGGATCGGCGCCGTCGTGAGTGTCGATGCACGGCCTGTCGTCGTCGCCCGCGAGCGTGACGGCATGGGTCGCCAGCTGCCGGTCTGGCAGGGTTGCCGCACGCTGCGCGCCGGCGAGCTGTTGATGCTCAATCCCGATCGCGCCGACAGCATGGACGGCCGCTATTTCGGCCCGTTGCCGGCCTCGACCGTGCTCGGCCGCGCCACGCCGATCCTCACCCGCGACACCCCCGACGCGCCGCTCACCTGGTGCTGA
PROTEIN sequence
Length: 182
MTRRGWTIATVVAASLFGVSFAAVSVFDPLPRVVWNASASAPIGLYRIVPEGDPPLGALVAVTPPAPLARWLAERGYLGERVPLLKHVAAKSGQRVCRIGAVVSVDARPVVVARERDGMGRQLPVWQGCRTLRAGELLMLNPDRADSMDGRYFGPLPASTVLGRATPILTRDTPDAPLTWC*