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SCNpilot_expt_1000_bf_scaffold_1197_curated_38

Organism: scnpilot_dereplicated_Microbacterium_3

near complete RP 46 / 55 MC: 2 BSCG 45 / 51 MC: 2 ASCG 12 / 38
Location: 39139..39774

Top 3 Functional Annotations

Value Algorithm Source
Transposase, undefined n=1 Tax=Leifsonia rubra CMS 76R RepID=S7VZW1_9MICO similarity UNIREF
DB: UNIREF100
  • Identity: 54.5
  • Coverage: 209.0
  • Bit_score: 222
  • Evalue 5.70e-55
Integrase core domain protein {ECO:0000313|EMBL:KJL36675.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.9
  • Coverage: 171.0
  • Bit_score: 309
  • Evalue 2.90e-81
integrase catalytic subunit similarity KEGG
DB: KEGG
  • Identity: 51.9
  • Coverage: 216.0
  • Bit_score: 212
  • Evalue 1.10e-52

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Taxonomy

Microbacterium ginsengisoli → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 636
GTGTCTCAGCGAGATTGGGACGATGCTCATCTGGTCAACGCGGCGATCGACGTGCATGCCGACGACCCAGCGTTCGGTTACCGGTTCATCGCGGGCGAGCTCGCCGAGGCGGGGTTCACCGCCTCGGAGCGGCGGGTATGGCGGGTGTGTTCGGAGAACGAGATCTTCAGCGCGTTCGTCCGCAAACGCCGCGGCAAGGGGCGCCTGGTCGGCTCGCCGGTGCGGGATGACCTCGTCCGGCGCGAGTTCACCGCGCCCGGCCCTGACCGGCTCTGGCTCACCGACATCTCGGAGCACTCGACCGGTGAGGGGAAGATCTACCTCTGCGCCGTGAAGGACATCTGGTCAAACCGGATCGTCGGGTACTCGATCAACGAACGCATGACCTCAGAGCTGGCCGTCTCGGCCCTGCGGATGGCGATCCAGCGCCGCAACCCCGCCGCCACCACCGTTCACAGCGATCGAGGAAGCCAGGGCGGATTCAACTGGTTGTCGCAACACCTCGATCGAGAGGTGTTCAACGATGGTGACGGCGGATTGGAGCAAGAAGACCAGCGAAGTGCCCGTGAGTGCGCGTCGGCAGTGGCGTGCGGATCGAGCGTTGCGGCCGCCGATGCGTTCGCCTGGGCGGCCTGA
PROTEIN sequence
Length: 212
VSQRDWDDAHLVNAAIDVHADDPAFGYRFIAGELAEAGFTASERRVWRVCSENEIFSAFVRKRRGKGRLVGSPVRDDLVRREFTAPGPDRLWLTDISEHSTGEGKIYLCAVKDIWSNRIVGYSINERMTSELAVSALRMAIQRRNPAATTVHSDRGSQGGFNWLSQHLDREVFNDGDGGLEQEDQRSARECASAVACGSSVAAADAFAWAA*