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SCNpilot_expt_1000_bf_scaffold_1197_curated

Search features with annotation key words

Displaying items 31-48 of 48 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_1197_curated_31
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

31658..32395
DNA (738bp) protein (246aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034C1EC0
Uncharacterized protein {ECO:0000313|EMBL:KDA05391.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1197_curated_32
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(32405..32950)
DNA (546bp) protein (182aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI00030E88E7
Contig_4, whole genome shotgun sequence {ECO:0000313|EMBL:KIP94956.1}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;"
sphingosine kinase and enzyme; K07029
SCNpilot_expt_1000_bf_scaffold_1197_curated_33
unknown

Not on your lists

33007..33249
DNA (243bp) protein (81aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_1197_curated_34
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

33479..34804
DNA (1326bp) protein (442aa)
Serine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00176}; EC=6.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00176};; Seryl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00176}; Seryl-tRNA(Ser/Sec) synthetase {ECO:0000256|HAMAP-Rule:MF_00176}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
seryl-tRNA synthetase; K01875 seryl-tRNA synthetase [EC:6.1.1.11]
seryl-tRNA synthetase n=1 Tax=Microbacterium barkeri RepID=UPI00031A2A6E
SCNpilot_expt_1000_bf_scaffold_1197_curated_35
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

34801..35595
DNA (795bp) protein (265aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002E857C3
Contig_4, whole genome shotgun sequence {ECO:0000313|EMBL:KIP94958.1}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;"
hydrolase of the HAD superfamily
SCNpilot_expt_1000_bf_scaffold_1197_curated_36
Microbacterium maritypicum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

35818..37080
DNA (1263bp) protein (421aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5L3I1_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EQM86864.1}; TaxID=1333857 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium maritypicum MF109.;"
transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_1197_curated_37
Blastococcus saxobsidens, Blastococcus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(37743..38789)
DNA (1047bp) protein (349aa)
transposase n=1 Tax=Citricoccus sp. CH26A RepID=UPI000255F3BD
putative transposase
Putative transposase {ECO:0000313|EMBL:CCG02766.1}; TaxID=1146883 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Blastococcus.;" source="Blastococcus saxobsidens (strain DD2).;"
SCNpilot_expt_1000_bf_scaffold_1197_curated_38
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

39139..39774
DNA (636bp) protein (212aa)
Transposase, undefined n=1 Tax=Leifsonia rubra CMS 76R RepID=S7VZW1_9MICO
Integrase core domain protein {ECO:0000313|EMBL:KJL36675.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
integrase catalytic subunit
SCNpilot_expt_1000_bf_scaffold_1197_curated_39
Propionibacterium freudenreichii, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

39788..41101
DNA (1314bp) protein (438aa)
Integrase core domain protein n=1 Tax=Mycobacterium parascrofulaceum ATCC BAA-614 RepID=D5P1F7_9MYCO
Transposase insI for insertion sequence element IS30B/C/D {ECO:0000313|EMBL:AJQ91308.1}; TaxID=66712 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium freudenreichii subsp. freudenreichii.;"
integrase catalytic subunit
SCNpilot_expt_1000_bf_scaffold_1197_curated_40
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

41166..41399
DNA (234bp) protein (78aa)
Transposase-like protein n=9 Tax=Mycobacterium abscessus RepID=B1MPB8_MYCA9
Integrase core domain protein {ECO:0000313|EMBL:KJL36675.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
integrase catalytic subunit
SCNpilot_expt_1000_bf_scaffold_1197_curated_41
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(41465..41983)
DNA (519bp) protein (173aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AVB2_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EPD86042.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
integrase catalytic domain-containing protein
SCNpilot_expt_1000_bf_scaffold_1197_curated_42
unknown

Not on your lists

42175..42288
DNA (114bp) protein (38aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_1197_curated_43
Propionibacterium freudenreichii, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(42799..43818)
DNA (1020bp) protein (340aa)
Transcriptional regulator, LacI family n=1 Tax=Propionibacterium acidipropionici (strain ATCC 4875 / DSM 20272 / JCM 6432 / NBRC 12425 / NCIMB 8070) RepID=K7S1V9_PROA4
HTH-type transcriptional repressor purR {ECO:0000313|EMBL:CEI46169.1}; TaxID=1744 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium freudenreichii.;"
Transcriptional regulator, LacI family
SCNpilot_expt_1000_bf_scaffold_1197_curated_44
Propionibacterium acidipropionici, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

44072..46267
DNA (2196bp) protein (732aa)
Alpha-galactosidase (EC:3.2.1.22)
Alpha-galactosidase {ECO:0000313|EMBL:AFV88161.1}; EC=3.2.1.22 {ECO:0000313|EMBL:AFV88161.1};; TaxID=1171373 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium acidipropionici (strain ATCC 4875 / DSM 20272 / JCM; 6432 / NBRC 12425 / NCIMB 8070).;"
Alpha-galactosidase n=1 Tax=Propionibacterium acidipropionici (strain ATCC 4875 / DSM 20272 / JCM 6432 / NBRC 12425 / NCIMB 8070) RepID=K7RPB5_PROA4
SCNpilot_expt_1000_bf_scaffold_1197_curated_45
Actinomyces europaeus, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

46333..47589
DNA (1257bp) protein (419aa)
Uncharacterized protein n=1 Tax=Actinomyces europaeus ACS-120-V-Col10b RepID=S2WTS0_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EPD31129.1}; TaxID=883069 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces europaeus ACS-120-V-Col10b.;"
putative ABC transporter substrate-binding protein; K10117 multiple sugar transport system substrate-binding protein
SCNpilot_expt_1000_bf_scaffold_1197_curated_46
Propionibacterium freudenreichii, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

47673..48590
DNA (918bp) protein (306aa)
Uncharacterized protein n=1 Tax=Actinomyces europaeus ACS-120-V-Col10b RepID=S2VYF6_9ACTO
Inner membrane of melibiose ABC transporter AmyD {ECO:0000313|EMBL:CEI46172.1}; TaxID=1744 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium freudenreichii.;"
putative ABC transporter permease; K10118 multiple sugar transport system permease protein
SCNpilot_expt_1000_bf_scaffold_1197_curated_47
Propionibacterium freudenreichii, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

48592..49410
DNA (819bp) protein (273aa)
maltose ABC transporter permease n=1 Tax=Glaciibacter superstes RepID=UPI0003B40B16
Inner membrane of melibiose ABC trnasporter {ECO:0000313|EMBL:CEI46173.1}; TaxID=1744 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium freudenreichii.;"
putative ABC transporter permease; K10119 multiple sugar transport system permease protein
SCNpilot_expt_1000_bf_scaffold_1197_curated_48
unknown

Not on your lists

49550..49759
DNA (210bp) protein (70aa)

This feature has no annotations

Displaying items 31-48 of 48 in total

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