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SCNpilot_expt_1000_bf_scaffold_1197_curated_43

Organism: scnpilot_dereplicated_Microbacterium_3

near complete RP 46 / 55 MC: 2 BSCG 45 / 51 MC: 2 ASCG 12 / 38
Location: comp(42799..43818)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, LacI family n=1 Tax=Propionibacterium acidipropionici (strain ATCC 4875 / DSM 20272 / JCM 6432 / NBRC 12425 / NCIMB 8070) RepID=K7S1V9_PROA4 similarity UNIREF
DB: UNIREF100
  • Identity: 49.1
  • Coverage: 324.0
  • Bit_score: 299
  • Evalue 4.50e-78
HTH-type transcriptional repressor purR {ECO:0000313|EMBL:CEI46169.1}; TaxID=1744 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium freudenreichii.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 50.3
  • Coverage: 330.0
  • Bit_score: 311
  • Evalue 1.20e-81
Transcriptional regulator, LacI family similarity KEGG
DB: KEGG
  • Identity: 49.1
  • Coverage: 324.0
  • Bit_score: 299
  • Evalue 1.40e-78

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Taxonomy

Propionibacterium freudenreichii → Propionibacterium → Propionibacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1020
GTGAACGCCACCAGACCGCAGCGCCCGGCGACCCGCGCCGACGTCGCCCGTCTGGCGGGGGTGAGCACCGCCGTCGTCAGTTACGTCATCAACGACGGACCCCGCCCGGTCGCCGCCGCGACTCGGGACCGGGTACTCGCCGCGGTGGACCAGCTCGGCTATCGGCCCAATGCCTCCGCGAGAGCGCTCAAGCTCGGGGGAACGCGCACCATCGGACTGATGCTGTCCGAGATCGTGAACCCGTTCCACTCCGAGTGCATCGATGCTCTGGATGCGGCGGCCACCGCACGGGGGTATTCGATGCTGCTGGCCAGCACCCACAACGATGAGACCCGTCAGGCTCAGATGCGCGCCGATCTCGTCGACCGCGGCGTGGAGGGCCTGGTCTTCCTCTCCCTGTACCCCGACCGGAAGGACGCGCCGCGCGCATCCGGGGGTGATGTGCCGCAGGTGATCATCGACCGTTCCATTCCCACTCCCGGGTTCTCGACGGTGGGCTCCGATGCCCGGGCGGGTGCAACGCTCGCGGTGAGCCACCTGCTCGAGCACGGACATCGCTCGATCGCCTATATGGAGGGCCCCCTCGATCCGCTCGTCGGCGACGAGCGCCGAGTCGGGTGGGAGCGCGCGCTCGCGCACGCGGGCCTCACGCCCGAGCACCTGGCCACCACGAGTTGGGATCGGCGCGGCGGCGCGGAGGCCGCGCGGCACTTCATGGGCCTTTCCAAACCCCCCACGGCGATCTTCGCGGGTTCGGACCTGATGGCGATCGGCGCCCTCCAGGCGCTACACGAGTTGGACAGGGACGTTCCCGCGGATGTAGCCGTGATCTCCTTCGACGGCACGGCCGAGTCGGAGTACTCCTGGCCACCGCTGACGACCGTGCGCCACCGCTACCGTGACGTGGCGGACGCCGCCGTCGCCGTACTCGCGGAGCGAAGGGGAACGCCGACCGCCGCGTTGTTCGAGATGGACATCATCGTGCGCGCCTCGTGCGGATGCACGCCGGCAAGTCATTGA
PROTEIN sequence
Length: 340
VNATRPQRPATRADVARLAGVSTAVVSYVINDGPRPVAAATRDRVLAAVDQLGYRPNASARALKLGGTRTIGLMLSEIVNPFHSECIDALDAAATARGYSMLLASTHNDETRQAQMRADLVDRGVEGLVFLSLYPDRKDAPRASGGDVPQVIIDRSIPTPGFSTVGSDARAGATLAVSHLLEHGHRSIAYMEGPLDPLVGDERRVGWERALAHAGLTPEHLATTSWDRRGGAEAARHFMGLSKPPTAIFAGSDLMAIGALQALHELDRDVPADVAVISFDGTAESEYSWPPLTTVRHRYRDVADAAVAVLAERRGTPTAALFEMDIIVRASCGCTPASH*