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SCNpilot_expt_1000_bf_scaffold_1197_curated_39

Organism: scnpilot_dereplicated_Microbacterium_3

near complete RP 46 / 55 MC: 2 BSCG 45 / 51 MC: 2 ASCG 12 / 38
Location: 39788..41101

Top 3 Functional Annotations

Value Algorithm Source
Integrase core domain protein n=1 Tax=Mycobacterium parascrofulaceum ATCC BAA-614 RepID=D5P1F7_9MYCO similarity UNIREF
DB: UNIREF100
  • Identity: 92.2
  • Coverage: 436.0
  • Bit_score: 809
  • Evalue 1.30e-231
Transposase insI for insertion sequence element IS30B/C/D {ECO:0000313|EMBL:AJQ91308.1}; TaxID=66712 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium freudenreichii subsp. freudenreichii.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.0
  • Coverage: 436.0
  • Bit_score: 811
  • Evalue 4.90e-232
integrase catalytic subunit similarity KEGG
DB: KEGG
  • Identity: 84.2
  • Coverage: 437.0
  • Bit_score: 755
  • Evalue 9.30e-216

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Taxonomy

Propionibacterium freudenreichii → Propionibacterium → Propionibacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1314
GTGCAGCGGCAGTTCTGGTGTCTGATTGCGACGGGCATCACCTCGGCCGAGGCGGCGCTGAAGGTGGGCGTGTCCGTGCCGGTCGGGACCCGTTGGTTTCGCCACGCTGGCGGCATGCCACCGATCTCATTGGCCGAGCCCATCGGTCGCTACCTGTCCTTCGAAGAGCGCGAGGAGATCGCGTTGCTGCGCGCCAAAGAGGTCGGCGTTCGTGAGATCGCGCGCAGGATCGGCCGCGATCCGGGAACGATCTCCCGCGAGCTGCGCCGCAATGCCGCCACGCGCAGCAGAAAACTGGAGCATCGGGCATTGGTGGCGCAATGGAAGGCTCAGCAGGCGGCGAAGCGACCAAAGACGGCCAGGCTGGTGACCAACGACAGGTTGCGTGAGTACGTCCAGGAGCGCCTCGCTGGCAACGTCCGCCGACCGGACGGCACCATCGTTGTCGGGCCGGAGCCGCCCGCGTGGAAGGGGTTGAACAAACCGCACCGGCAGGACCGGCGGTGGGTGATTGCGTGGAGTCCGGAACAGATCTCGCACCGGCTGAAGGCCGACTTCCCGGATGATGAGTCCATGCGCATCAGCCACGAGGCGATCTACCAGTCGCTGTTCATCCAGGGCCGTGGCGCGCTCACACGCGAACTGGTCACCTGCCTGCGAACCGGCCGCGCACTCCGTCAGCCACGAGCTCGAGCGCAGAACCGACCGCAAGGGCATGTCACCGCCGATGTCGTGTTCTCGAAGCGTCCCGCGGAGGCCGCGGACCGCGCCGTTCCTGGGCTCTGGGAGGGGGATCTGATCATCGGAACGGGCCGATCGGCGATCGGCACTGTCGTCGAGCGCAAGAGCCGCTCGACTCTGCTGGTGCACCTGCCCCGCCTGGAGGGCTGGGGCGAGAACCCATATGTGAAGAACGGTCCTGCACTGGGAGGCTACGGCGCCGTCGCGATGAACGCCACGCTCATCGCGACCATGACCAAGCTCCCCGAACAGCTCCGGAAGACGCTCACGTGGGACCGCGGCAAGGAGCTCTCCGCCCACGTCCAGTTCGCGCTCGAGACGGGCACGAAGGTGTTCTTCGCTGATCCCCACTCGCCCTGGCAACGGCCGACGAACGAGAACACAAACGGGTTGCTGCGACAGTACTTCCCGAAGGGCACCGACCTCTCACGCTGGTCCGCGGAAGACCTCGAAGCCGTCGCTCTCGCGCTCAACAACCGGCCACGGAAAAGCCTGAACTGGCGCACTCCCGCGGAAGTCTTCGAGGAGCAGTTACGCTCGCTTCAACAACACGGTGTTGCAACGACCGATTGA
PROTEIN sequence
Length: 438
VQRQFWCLIATGITSAEAALKVGVSVPVGTRWFRHAGGMPPISLAEPIGRYLSFEEREEIALLRAKEVGVREIARRIGRDPGTISRELRRNAATRSRKLEHRALVAQWKAQQAAKRPKTARLVTNDRLREYVQERLAGNVRRPDGTIVVGPEPPAWKGLNKPHRQDRRWVIAWSPEQISHRLKADFPDDESMRISHEAIYQSLFIQGRGALTRELVTCLRTGRALRQPRARAQNRPQGHVTADVVFSKRPAEAADRAVPGLWEGDLIIGTGRSAIGTVVERKSRSTLLVHLPRLEGWGENPYVKNGPALGGYGAVAMNATLIATMTKLPEQLRKTLTWDRGKELSAHVQFALETGTKVFFADPHSPWQRPTNENTNGLLRQYFPKGTDLSRWSAEDLEAVALALNNRPRKSLNWRTPAEVFEEQLRSLQQHGVATTD*