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scnpilot_p_inoc_scaffold_0_curated_152

Organism: scnpilot_dereplicated_Microbacterium_4

near complete RP 52 / 55 MC: 4 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: 164502..165383

Top 3 Functional Annotations

Value Algorithm Source
shikimate 5-dehydrogenase; K00014 shikimate dehydrogenase [EC:1.1.1.25] similarity KEGG
DB: KEGG
  • Identity: 86.4
  • Coverage: 287.0
  • Bit_score: 497
  • Evalue 4.00e-138
shikimate dehydrogenase n=1 Tax=Microbacterium sp. B19 RepID=UPI00034A6100 similarity UNIREF
DB: UNIREF100
  • Identity: 93.5
  • Coverage: 294.0
  • Bit_score: 547
  • Evalue 1.10e-152
Shikimate 5-dehydrogenase {ECO:0000313|EMBL:BAJ76488.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.4
  • Coverage: 287.0
  • Bit_score: 497
  • Evalue 1.80e-137

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Taxonomy

Microbacterium testaceum → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 882
GTGATCGACTCGCACCCGTACCTCGTGGGCCTCATCGGCGCGGGCGTCCTGCCCTCGCTCACTCCGCCGATGCACATGGCCGAGGCGCGCGCGCTCGGCCTGACCTACGTCTACCGGCCCCTCGACCTCCCCTCGCTCGGCATCGACCCCGCCCGCATCGGCGACGTGCTCGCCTGGGCGGAGCGCCTCGGCTACGACGCGGTCAACGTCACGCACCCGTGCAAGCAGAGCGTGATCGCGCACCTCGACCGCATCGACCCCGTGGCCGCAGCGCTGGGCGCCGTGAACACCGTCCTGTTCACACCCTCGGGCCGCGTCGGCTACAACACCGACACGACCGGGTTCGCCGCCGCCTTCGGCGAGGGACTCCCGGATGCCGTGACCGACCGGGTGGTGCAGCTCGGGGCGGGAGGAGCCGGGTCCGCCGTCGCCGATGCCCTGCTGCGCTCGGGTGCGGCGCAGCTCACGATCGTCGACATCGACGCCGCCCGCGCCGGTGCCCTCGCCGGAGACCTCGCGGCACGGCATCCGTCCGCCGTGGTCGACTCCGCCGTGCCCGCCGATCTCGCGGCCGTGCTCGCGGGAGCCGACGGTCTCGTGCACTGCACGCCCGTCGGGATGGCCGAGCACCCCGGACTCCCCCTGGATGCCGACCTGCTGCGGCCCGACCTCTGGGTCGCCGACATCGTCTACCGGCCGCTCGACACCGAGCTGCTGATCACCGCGCGCGAACGCGGCTGCCGCACCCTCGGCGGCGGACGGATGGCGGTCCACCAGGCCGTCGACGCTTTCGCCCTCATCACCGGGACGCGACCCGATCCCGACCGCATGACCGCCCATTTCCTCGACCTCGTCGCCGCCGGCGACGTCCTCGCCCGCTAA
PROTEIN sequence
Length: 294
VIDSHPYLVGLIGAGVLPSLTPPMHMAEARALGLTYVYRPLDLPSLGIDPARIGDVLAWAERLGYDAVNVTHPCKQSVIAHLDRIDPVAAALGAVNTVLFTPSGRVGYNTDTTGFAAAFGEGLPDAVTDRVVQLGAGGAGSAVADALLRSGAAQLTIVDIDAARAGALAGDLAARHPSAVVDSAVPADLAAVLAGADGLVHCTPVGMAEHPGLPLDADLLRPDLWVADIVYRPLDTELLITARERGCRTLGGGRMAVHQAVDAFALITGTRPDPDRMTAHFLDLVAAGDVLAR*