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SCNpilot_cont_1000_p_scaffold_7_curated_148

Organism: scnpilot_dereplicated_Mucilaginibacter_1

near complete RP 52 / 55 MC: 3 BSCG 50 / 51 ASCG 15 / 38
Location: comp(190378..191403)

Top 3 Functional Annotations

Value Algorithm Source
periplasmic binding protein/LacI transcriptional regulator (EC:5.1.1.1) similarity KEGG
DB: KEGG
  • Identity: 64.9
  • Coverage: 342.0
  • Bit_score: 456
  • Evalue 9.10e-126
Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XYJ0_PEDHD similarity UNIREF
DB: UNIREF100
  • Identity: 64.9
  • Coverage: 342.0
  • Bit_score: 456
  • Evalue 2.90e-125
Contig119, whole genome shotgun sequence {ECO:0000313|EMBL:KIO74997.1}; TaxID=1503925 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. NL19.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.5
  • Coverage: 341.0
  • Bit_score: 457
  • Evalue 1.40e-125

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Taxonomy

Pedobacter sp. NL19 → Pedobacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1026
ATGCAATCAAAACCGGCAACAATAAAAGCCATAGCGCAAATTTTGGGTATTTCGGCTTCCACCGTGTCCAGAGCCCTGCATGACCACGCCAGTATAGGGCTAACCACAAAGGCTAAAGTTAAAAAGCTGGCCGAGGAACTGAATTATGAGCCTAATCAAACGGCCATATTCCTTCAAAAAGGGAAAACACACACCATAGGGGTAATATTGCCCGAATTGGCCGAAGATTTTTTCTCCACTGCGGTAAGCGCTATTGAAGATACCGCATACAAAAAAAACTATACGGTTCTTATAGCCCAGTCGCATGACGATGAAGCAAAAGAGAAGCTCCTGGTAGAAAAAATGAAAAGTCACCGGGTTGAGGGTTTATTAGTATCGGTAGGTAAAAATACATCCTCTTACCAGCATTTTGAAGACCTTAAAAAGTACAACATACCCGTGGTGTATTTCGACAGGATACCCGGCATCCCTAATATCCATTACGTAGCCTGCAATATGGAAACCGGTACCATAGAGGCTGTTAATTATCTGCTGAGGAAAGGCCATCGTGTAATTGGCATGATCAACGGGCCGCAGGCGATGGTAGCAACCGGCGAGCGAAGGGAGGGTTACATTAGCGCGATGACCAAAAATAGGTTAAAGTATGATCCATCACTCATCGTTTCCTGCGATTTAACGGAACAGGATACCCAAAGGGCGCTTGAGCAGTTACTCAATAACAAGCGCAAGCCTACGGCCATTGTAACCTTTAATGATTATGTGGCACTTTTTGCTATCAAACATGCGAAAAAGCTAAATGTGAAACTCAACGAGGAACTTGAGCTGGTAAGTTATGCCAATTTGCCCCTCATAAACTATATGGATAATATCCCGGTAGCCTCTGTTGAGCAATTTCCCTACCTTCAAGGCCAAAAAGCGACTGATATTTTGATGGATCTGCTTCATCATAAAACTACCGCGGCCAGTGAGCCGGGCGCGTTTTACAAAGTGATTATCGAGTCGCAACTGGTAGAGAACAAACGATAA
PROTEIN sequence
Length: 342
MQSKPATIKAIAQILGISASTVSRALHDHASIGLTTKAKVKKLAEELNYEPNQTAIFLQKGKTHTIGVILPELAEDFFSTAVSAIEDTAYKKNYTVLIAQSHDDEAKEKLLVEKMKSHRVEGLLVSVGKNTSSYQHFEDLKKYNIPVVYFDRIPGIPNIHYVACNMETGTIEAVNYLLRKGHRVIGMINGPQAMVATGERREGYISAMTKNRLKYDPSLIVSCDLTEQDTQRALEQLLNNKRKPTAIVTFNDYVALFAIKHAKKLNVKLNEELELVSYANLPLINYMDNIPVASVEQFPYLQGQKATDILMDLLHHKTTAASEPGAFYKVIIESQLVENKR*