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SCNpilot_cont_1000_p_scaffold_7_curated

Search features with annotation key words

Displaying items 121-150 of 451 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_7_curated_121
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(145155..147332)
DNA (2178bp) protein (726aa)
Glycoside hydrolase family 43 n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YA21_9SPHI
Glycoside hydrolase family 43 {ECO:0000313|EMBL:EHQ25005.1}; Flags: Precursor;; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
glycoside hydrolase family protein
SCNpilot_cont_1000_p_scaffold_7_curated_122
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(147386..148420)
DNA (1035bp) protein (345aa)
Alcohol dehydrogenase GroES domain protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PRZ0_CHIPD
alcohol dehydrogenase GroES domain-containing protein
Alcohol dehydrogenase GroES domain protein {ECO:0000313|EMBL:ACU60784.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_cont_1000_p_scaffold_7_curated_123
Sphingobacterium sp. 21, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(148449..150431)
DNA (1983bp) protein (661aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037DBC61
alpha-L-arabinofuranosidase
Alpha-L-arabinofuranosidase domain protein {ECO:0000313|EMBL:ADZ77596.1}; Flags: Precursor;; TaxID=743722 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. (strain 21).;"
SCNpilot_cont_1000_p_scaffold_7_curated_124
Flammeovirgaceae bacterium 311, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(150442..151989)
DNA (1548bp) protein (516aa)
alpha-L-arabinofuranosidase; K01209 alpha-N-arabinofuranosidase [EC:3.2.1.55]
alpha-N-arabinofuranosidase n=1 Tax=Segetibacter koreensis RepID=UPI000364F844
Alpha-L-arabinofuranosidase {ECO:0000313|EMBL:AHM61098.1}; TaxID=1257021 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; unclassified Flammeovirgaceae.;" source="Flammeovirgaceae bacterium 311.;"
SCNpilot_cont_1000_p_scaffold_7_curated_125
Pedobacter kyungheensis, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(152004..153185)
DNA (1182bp) protein (394aa)
aldose 1-epimerase (EC:5.1.3.3); K01785 aldose 1-epimerase [EC:5.1.3.3]
Aldose 1-epimerase {ECO:0000256|PIRNR:PIRNR005096}; EC=5.1.3.3 {ECO:0000256|PIRNR:PIRNR005096};; Galactose mutarotase {ECO:0000256|PIRNR:PIRNR005096}; TaxID=1069985 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter kyungheensis.;"
Aldose 1-epimerase n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6Y101_PEDHD
SCNpilot_cont_1000_p_scaffold_7_curated_126
unknown

Not on your lists

153450..153674
DNA (225bp) protein (75aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_7_curated_127
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(153733..155559)
DNA (1827bp) protein (609aa)
Glycoside hydrolase family 35 n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y8I4_9SPHI
Glycoside hydrolase family 35 {ECO:0000313|EMBL:EHQ25902.1}; Flags: Precursor;; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
glycoside hydrolase family protein
SCNpilot_cont_1000_p_scaffold_7_curated_128
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(155581..157995)
DNA (2415bp) protein (805aa)
Glycoside hydrolase family 2 sugar binding n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y8I5_9SPHI
Glycoside hydrolase family 2 sugar binding {ECO:0000313|EMBL:EHQ25903.1}; Flags: Precursor;; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
beta-galactosidase
SCNpilot_cont_1000_p_scaffold_7_curated_129
Pedobacter sp. V48, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(158146..159864)
DNA (1719bp) protein (573aa)
carbohydrate-binding protein SusD n=1 Tax=Cytophagales str. B6 RepID=UPI0003B6B0F7
Uncharacterized protein {ECO:0000313|EMBL:ETZ24716.1}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V48.;"
RagB/SusD domain-containing protein
SCNpilot_cont_1000_p_scaffold_7_curated_130
Pedobacter sp. V48, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(159876..163055)
DNA (3180bp) protein (1060aa)
TonB-denpendent receptor n=1 Tax=Cytophagales str. B6 RepID=UPI0003B32A1A
Uncharacterized protein {ECO:0000313|EMBL:ETZ24717.1}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V48.;"
TonB-dependent receptor
SCNpilot_cont_1000_p_scaffold_7_curated_131
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(163411..167505)
DNA (4095bp) protein (1365aa)
Histidine kinase n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y8I8_9SPHI
Histidine kinase {ECO:0000313|EMBL:EHQ25906.1}; Flags: Precursor;; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
histidine kinase
SCNpilot_cont_1000_p_scaffold_7_curated_132
Pedobacter antarcticus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

167871..168578
DNA (708bp) protein (236aa)
DNA mistmatch repair protein MutT n=1 Tax=Cytophagales str. B6 RepID=UPI0003B4BAA6
DNA mismatch repair protein MutT {ECO:0000313|EMBL:KEQ31026.1}; TaxID=1358423 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter antarcticus 4BY.;"
NUDIX hydrolase
SCNpilot_cont_1000_p_scaffold_7_curated_133
Flavobacterium subsaxonicum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(168654..170339)
DNA (1686bp) protein (562aa)
SSS sodium solute transporter superfamily n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YEH3_9SPHI
Sodium transporter {ECO:0000313|EMBL:KGO91409.1}; TaxID=1121898 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium subsaxonicum WB 4.1-42 = DSM 21790.;"
sss sodium solute transporter superfamily; K03307 solute:Na+ symporter, SSS family
SCNpilot_cont_1000_p_scaffold_7_curated_134
Flavobacterium subsaxonicum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(170397..171893)
DNA (1497bp) protein (499aa)
L-arabinose isomerase {ECO:0000256|HAMAP-Rule:MF_00519, ECO:0000256|SAAS:SAAS00008909}; EC=5.3.1.4 {ECO:0000256|HAMAP-Rule:MF_00519, ECO:0000256|SAAS:SAAS00008909};; TaxID=1121898 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium subsaxonicum WB 4.1-42 = DSM 21790.;"
L-arabinose isomerase (EC:5.3.1.4); K01804 L-arabinose isomerase [EC:5.3.1.4]
arabinose isomerase n=1 Tax=Flavobacterium rivuli RepID=UPI00037BA29A
SCNpilot_cont_1000_p_scaffold_7_curated_135
Draconibacterium sp. JN14CK-3, Draconibacterium, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(171915..173315)
DNA (1401bp) protein (467aa)
Alpha-galactosidase {ECO:0000256|RuleBase:RU361168}; EC=3.2.1.22 {ECO:0000256|RuleBase:RU361168};; Melibiase {ECO:0000256|RuleBase:RU361168}; TaxID=1544798 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prolixibacteraceae; Draconibacterium.;" source="Draconibacterium sp. JN14CK-3.;"
Alpha-galactosidase (EC:3.2.1.22)
hypothetical protein n=1 Tax=Flexithrix dorotheae RepID=UPI00036D4161
SCNpilot_cont_1000_p_scaffold_7_curated_136
Sphingobacterium sp. 21, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(173287..173985)
DNA (699bp) protein (233aa)
L-ribulose-5-phosphate 4-epimerase; K01786 L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
L-ribulose-5-phosphate 4-epimerase {ECO:0000313|EMBL:ADZ77600.1}; EC=5.1.3.4 {ECO:0000313|EMBL:ADZ77600.1};; TaxID=743722 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. (strain 21).;"
L-ribulose-5-phosphate 4-epimerase n=1 Tax=Cytophagales str. B6 RepID=UPI0003B60D11
SCNpilot_cont_1000_p_scaffold_7_curated_137
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(173989..175698)
DNA (1710bp) protein (570aa)
Ribulokinase {ECO:0000256|RuleBase:RU003455, ECO:0000256|SAAS:SAAS00183333}; EC=2.7.1.16 {ECO:0000256|RuleBase:RU003455, ECO:0000256|SAAS:SAAS00183333};; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
ribulokinase; K00853 L-ribulokinase [EC:2.7.1.16]
Ribulokinase n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y2N4_9SPHI
SCNpilot_cont_1000_p_scaffold_7_curated_138
Sphingobacterium sp. 21, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(175784..176380)
DNA (597bp) protein (199aa)
HAD-superfamily hydrolase, subfamily IA, variant 3 n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4C209_SPHS2
HAD superfamily hydrolase
HAD-superfamily hydrolase, subfamily IA, variant 3 {ECO:0000313|EMBL:ADZ79659.1}; TaxID=743722 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. (strain 21).;"
SCNpilot_cont_1000_p_scaffold_7_curated_139
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(176674..179433)
DNA (2760bp) protein (920aa)
Putative uncharacterized protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y873_9SPHI
Putative uncharacterized protein {ECO:0000313|EMBL:EHQ31095.1}; Flags: Precursor;; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_7_curated_140
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(179452..181287)
DNA (1836bp) protein (612aa)
X-Pro dipeptidyl-peptidase n=1 Tax=Cytophagales str. B6 RepID=UPI0003B44470
Putative uncharacterized protein {ECO:0000313|EMBL:EHQ30640.1}; Flags: Precursor;; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_7_curated_141
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(181544..182788)
DNA (1245bp) protein (415aa)
FAD dependent oxidoreductase; K00285 D-amino-acid dehydrogenase [EC:1.4.99.1]
FAD dependent oxidoreductase n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YCG0_9SPHI
FAD dependent oxidoreductase {ECO:0000313|EMBL:EHQ30638.1}; Flags: Precursor;; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
SCNpilot_cont_1000_p_scaffold_7_curated_142
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(182800..183804)
DNA (1005bp) protein (335aa)
proline racemase; K12658 4-hydroxyproline epimerase [EC:5.1.1.8]
Proline racemase n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YCF9_9SPHI
Proline racemase {ECO:0000313|EMBL:EHQ30637.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
SCNpilot_cont_1000_p_scaffold_7_curated_143
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(183806..185386)
DNA (1581bp) protein (527aa)
aldehyde dehydrogenase; K14519 NADP-dependent aldehyde dehydrogenase [EC:1.2.1.4]
Aldehyde Dehydrogenase n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YCF8_9SPHI
Aldehyde Dehydrogenase {ECO:0000313|EMBL:EHQ30636.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
SCNpilot_cont_1000_p_scaffold_7_curated_144
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(185396..186334)
DNA (939bp) protein (313aa)
dihydrodipicolinate synthetase; K01714 dihydrodipicolinate synthase [EC:4.2.1.52]
Dihydrodipicolinate synthetase n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YCF7_9SPHI
Dihydrodipicolinate synthetase {ECO:0000313|EMBL:EHQ30635.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
SCNpilot_cont_1000_p_scaffold_7_curated_145
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

186795..189014
DNA (2220bp) protein (740aa)
1,4-alpha-glucan branching enzyme GlgB {ECO:0000256|HAMAP-Rule:MF_00685}; EC=2.4.1.18 {ECO:0000256|HAMAP-Rule:MF_00685};; 1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase {ECO:0000256|HAMAP-Rule:MF_00685}; Alpha-(1->4)-glucan branching enzyme {ECO:0000256|HAMAP-Rule:MF_00685}; Glycogen branching enzyme {ECO:0000256|HAMAP-Rule:MF_00685}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DS
1,4-alpha-glucan branching protein (EC:2.4.1.18); K00700 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
glycogen branching protein n=1 Tax=Cytophagales str. B6 RepID=UPI0003B3957D
SCNpilot_cont_1000_p_scaffold_7_curated_146
unknown

Not on your lists

189011..189211
DNA (201bp) protein (67aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_7_curated_147
Pedobacter sp. V48, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(189232..190290)
DNA (1059bp) protein (353aa)
aminoglycoside phosphotransferase n=1 Tax=Cytophagales str. B6 RepID=UPI0003B48E78
Uncharacterized protein {ECO:0000313|EMBL:ETZ22517.1}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V48.;"
aminoglycoside phosphotransferase
SCNpilot_cont_1000_p_scaffold_7_curated_148
Pedobacter sp. NL19, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(190378..191403)
DNA (1026bp) protein (342aa)
periplasmic binding protein/LacI transcriptional regulator (EC:5.1.1.1)
Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XYJ0_PEDHD
Contig119, whole genome shotgun sequence {ECO:0000313|EMBL:KIO74997.1}; TaxID=1503925 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. NL19.;"
SCNpilot_cont_1000_p_scaffold_7_curated_149
Pedobacter sp. V48, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

191661..192971
DNA (1311bp) protein (437aa)
hypothetical protein n=1 Tax=Cytophagales str. B6 RepID=UPI0003B6F006
Uncharacterized protein {ECO:0000313|EMBL:ETZ19580.1}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V48.;"
hypothetical protein (DUF3472)
SCNpilot_cont_1000_p_scaffold_7_curated_150
Flavobacterium hibernum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

193279..196335
DNA (3057bp) protein (1019aa)
hypothetical protein n=1 Tax=Cytophagales str. B6 RepID=UPI0003B5F332
Strain DSM 12611 Contig15, whole genome shotgun sequence {ECO:0000313|EMBL:KIO51463.1}; TaxID=37752 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium hibernum.;"
TonB-dependent receptor
Displaying items 121-150 of 451 in total

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