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SCNpilot_cont_1000_p_scaffold_7_curated

Search features with annotation key words

Displaying items 91-120 of 451 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_7_curated_91
Pedobacter antarcticus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(110216..111601)
DNA (1386bp) protein (462aa)
PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Pedobacter sp. BAL39 RepID=A6EKS3_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:KEQ28813.1}; TaxID=1358423 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter antarcticus 4BY.;"
pas/pac sensor protein
SCNpilot_cont_1000_p_scaffold_7_curated_92
Pedobacter sp. V48, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(111778..113613)
DNA (1836bp) protein (612aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V48.;"
Histidine kinase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PRB2_CHIPD
histidine kinase
SCNpilot_cont_1000_p_scaffold_7_curated_93
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(113677..114927)
DNA (1251bp) protein (417aa)
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1XZC5_9SPHI
Integral membrane sensor signal transduction histidine kinase {ECO:0000313|EMBL:EHQ25613.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
histidine kinase A domain-containing protein
SCNpilot_cont_1000_p_scaffold_7_curated_94
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(114924..115601)
DNA (678bp) protein (226aa)
Two component transcriptional regulator, winged helix family n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1XZC4_9SPHI
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:EHQ25612.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
response regulator receiver
SCNpilot_cont_1000_p_scaffold_7_curated_95
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

115734..116414
DNA (681bp) protein (227aa)
Putative Ni,Fe-hydrogenase I cytochrome b subunit n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1XZC3_9SPHI
Putative Ni,Fe-hydrogenase I cytochrome b subunit {ECO:0000313|EMBL:EHQ25611.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
cytochrome b
SCNpilot_cont_1000_p_scaffold_7_curated_96
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(116416..117642)
DNA (1227bp) protein (409aa)
Putative uncharacterized protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1XZC2_9SPHI
Putative uncharacterized protein {ECO:0000313|EMBL:EHQ25610.1}; Flags: Precursor;; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_7_curated_97
Pedobacter sp. BAL39, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(117661..117888)
DNA (228bp) protein (76aa)
hypothetical protein n=1 Tax=Cytophagales str. B6 RepID=UPI0003B3792F
Uncharacterized protein {ECO:0000313|EMBL:EDM37776.1}; TaxID=391596 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. BAL39.;"
lipoprotein
SCNpilot_cont_1000_p_scaffold_7_curated_98
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(117891..118841)
DNA (951bp) protein (317aa)
thiamine biosynthesis protein ApbE n=1 Tax=Cytophagales str. B6 RepID=UPI0003B34382
ApbE family lipoprotein {ECO:0000313|EMBL:EHQ25608.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
ApbE family lipoprotein; K03734 thiamine biosynthesis lipoprotein
SCNpilot_cont_1000_p_scaffold_7_curated_99
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(118828..119268)
DNA (441bp) protein (147aa)
Putative uncharacterized protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1XZB9_9SPHI
Putative uncharacterized protein {ECO:0000313|EMBL:EHQ25607.1}; Flags: Precursor;; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_7_curated_100
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(119288..119728)
DNA (441bp) protein (147aa)
Rieske (2Fe-2S) iron-sulfur domain-containing protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1XZB8_9SPHI
Rieske (2Fe-2S) iron-sulfur domain-containing protein {ECO:0000313|EMBL:EHQ25606.1}; Flags: Precursor;; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
Rieske (2Fe-2S) domain-containing protein
SCNpilot_cont_1000_p_scaffold_7_curated_101
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

120238..120537
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PLM0_CHIPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU60307.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_cont_1000_p_scaffold_7_curated_102
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

120713..121714
DNA (1002bp) protein (334aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PLM1_CHIPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU60308.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_cont_1000_p_scaffold_7_curated_103
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

121707..123077
DNA (1371bp) protein (457aa)
Secretion protein HlyD n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PLM2_CHIPD
secretion protein HlyD
Secretion protein HlyD {ECO:0000313|EMBL:ACU60309.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_cont_1000_p_scaffold_7_curated_104
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

123085..124536
DNA (1452bp) protein (484aa)
Putative outer membrane protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PLM3_CHIPD
outer membrane protein
Putative outer membrane protein {ECO:0000313|EMBL:ACU60310.1}; Flags: Precursor;; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_cont_1000_p_scaffold_7_curated_105
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(124701..127853)
DNA (3153bp) protein (1051aa)
Heavy metal efflux pump, CzcA family n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YA65_9SPHI
Heavy metal efflux pump, CzcA family {ECO:0000313|EMBL:EHQ25946.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
heavy metal efflux pump, czca family; K15726 cobalt-zinc-cadmium resistance protein CzcA
SCNpilot_cont_1000_p_scaffold_7_curated_106
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(127879..128976)
DNA (1098bp) protein (366aa)
RND transporter n=1 Tax=Cytophagales str. B6 RepID=UPI0003B78030
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:EHQ25947.1}; Flags: Precursor;; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
efflux transporter, rnd family, mfp subunit; K15727 cobalt-zinc-cadmium resistance protein CzcB
SCNpilot_cont_1000_p_scaffold_7_curated_107
Pedobacter sp. NL19, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(128997..130280)
DNA (1284bp) protein (428aa)
cation transporter n=1 Tax=Cytophagales str. B6 RepID=UPI0003B6E207
Contig2, whole genome shotgun sequence {ECO:0000313|EMBL:KIO79031.1}; TaxID=1503925 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. NL19.;"
outer membrane protein
SCNpilot_cont_1000_p_scaffold_7_curated_108
Pedobacter sp. NL19, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(130455..131798)
DNA (1344bp) protein (448aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1503925 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. NL19.;"
Integral membrane sensor signal transduction histidine kinase n=2 Tax=Myroides RepID=H1ZA50_MYROD
signal transduction histidine kinase
SCNpilot_cont_1000_p_scaffold_7_curated_109
Pedobacter sp. NL19, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(131800..132477)
DNA (678bp) protein (226aa)
PhoB family transcriptional regulator n=1 Tax=Myroides injenensis RepID=UPI0002897765
Contig2, whole genome shotgun sequence {ECO:0000313|EMBL:KIO79029.1}; TaxID=1503925 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. NL19.;"
transcriptional regulator; K07665 two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
SCNpilot_cont_1000_p_scaffold_7_curated_110
unknown

Not on your lists

comp(132682..132975)
DNA (294bp) protein (98aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_7_curated_111
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(133087..133596)
DNA (510bp) protein (170aa)
Putative uncharacterized protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y6A5_9SPHI
Putative uncharacterized protein {ECO:0000313|EMBL:EHQ24853.1}; Flags: Precursor;; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
SCNpilot_cont_1000_p_scaffold_7_curated_112
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(133630..134607)
DNA (978bp) protein (326aa)
Ankyrin n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y6A7_9SPHI
Ankyrin {ECO:0000313|EMBL:EHQ24855.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
ankyrin domain-containing protein
SCNpilot_cont_1000_p_scaffold_7_curated_113
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(134618..136048)
DNA (1431bp) protein (477aa)
ankyrin n=1 Tax=Cytophagales str. B6 RepID=UPI0003B417B2
Ankyrin {ECO:0000313|EMBL:EHQ24856.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
ankyrin domain-containing protein
SCNpilot_cont_1000_p_scaffold_7_curated_114
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(136045..136551)
DNA (507bp) protein (169aa)
Putative uncharacterized protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y6A9_9SPHI
Putative uncharacterized protein {ECO:0000313|EMBL:EHQ24857.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
SCNpilot_cont_1000_p_scaffold_7_curated_115
Pedobacter sp. BAL39, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(136672..137022)
DNA (351bp) protein (117aa)
Uncharacterized protein n=1 Tax=Pedobacter sp. BAL39 RepID=A6EGB6_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:EDM35550.1}; TaxID=391596 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. BAL39.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_7_curated_116
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

137243..138796
DNA (1554bp) protein (518aa)
Regulatory protein LuxR n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YBH8_9SPHI
Regulatory protein LuxR {ECO:0000313|EMBL:EHQ25049.1}; Flags: Precursor;; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
LuxR family transcriptional regulator
SCNpilot_cont_1000_p_scaffold_7_curated_117
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

138883..139149
DNA (267bp) protein (89aa)
Regulatory protein LuxR n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YBH8_9SPHI
Regulatory protein LuxR {ECO:0000313|EMBL:EHQ25049.1}; Flags: Precursor;; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
regulatory protein LuxR
SCNpilot_cont_1000_p_scaffold_7_curated_118
Pedobacter sp. BAL39, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

139247..139831
DNA (585bp) protein (195aa)
hypothetical protein n=1 Tax=Cytophagales str. B6 RepID=UPI0003B3D13B
Sensory box histidine kinase/response regulator {ECO:0000313|EMBL:EDM34183.1}; TaxID=391596 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. BAL39.;"
PAS/PAC sensor hybrid histidine kinase
SCNpilot_cont_1000_p_scaffold_7_curated_119
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

139855..140979
DNA (1125bp) protein (375aa)
Glycoside hydrolase family 43 n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y8J3_9SPHI
Glycoside hydrolase family 43 {ECO:0000313|EMBL:EHQ25911.1}; Flags: Precursor;; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
beta-glucanase precursor
SCNpilot_cont_1000_p_scaffold_7_curated_120
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(140989..144984)
DNA (3996bp) protein (1332aa)
non-ribosomal peptide synthetase modules (EC:6.3.2.-)
Non-ribosomal peptide synthetase domain protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y1Z8_9SPHI
Non-ribosomal peptide synthetase domain protein {ECO:0000313|EMBL:EHQ25701.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
Displaying items 91-120 of 451 in total

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