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scnpilot_p_inoc_scaffold_310_curated_62

Organism: scnpilot_dereplicated_Paludibacter_1

near complete RP 51 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: comp(49545..53837)

Top 3 Functional Annotations

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Value Algorithm Source
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.7
  • Coverage: 999.99
  • Bit_score: 2562
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6); K03046 DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] similarity KEGG
DB: KEGG
  • Identity: 89.7
  • Coverage: 999.99
  • Bit_score: 2562
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T571_PALPW similarity UNIREF
DB: UNIREF100
  • Identity: 89.7
  • Coverage: 999.99
  • Bit_score: 2562
  • Evalue 0.0

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Taxonomy

Paludibacter propionicigenes → Paludibacter → Bacteroidales → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 4293
ATGGCTTTTAAAACAGATAATAAGCTAAAATCAAATTTCAATAAAATTTCGATCGGTTTAGCATCTCCCGAAGAAATTTTAAAATTATCGAGTGGCGAAGTACTCAAACCGGAAACCATCAACTACCGTACTTACAAGCCGGAACGCGATGGCTTGTTCTGCGAGCGTATTTTTGGTCCCACCAAGGACTTCGAATGCCATTGCGGAAAGTATAAACGTATCCGTTATAAGGGGATCGTGTGCGACCGTTGTGGGGTGGAGGTTACCGAAAAGAAGGTACGTCGCGAACGGATGGGACATATCCAGTTGGTAGTGCCTGTGGCACATATCTGGTATTTCCGTTCGTTGCCGAATAAAATCGGATACCTGCTGGGTATGCCCACAAAGAAACTGGATGCGATTATCTATTACGAAAAATACGTGATTATTCAGGCCGGTATTGCTGCCAATGGCGAAAATATCGTCGATGGCGAGCTCATCACCGAGGAAGAATACCTGGACATCATGGATACGCTTCCACGCGAAAATCAATTACTCGAGGATAACGATCCGAACAAGTTCGTGGCGAAAATGGGTGCCGAAGCCATTCTGGACCTGCTTCAGCGGCTGAATCTCGACGATCTGTCGTACGAATTGCGCGATAAAGCCAACAACGACTCGTCGCAGCAACGTAAAAACGATGCATTGAAACGGCTTCAGATCGTTGAATCGTTCCGTGCTTCGCAGCATCGCAACAAACCCGAGTGGATGGTCGTGAAGATTGTTCCGGTCATCCCGCCCGAATTGCGTCCGTTGGTTCCGCTGGATGGCGGCCGTTTTGCCACTTCCGACCTCAACGACCTGTACCGTCGCGTTATCATCCGCAACAACCGTCTGAAACGTCTGATCGAAATCAAGGCTCCCGAAGTAATTCTGCGCAACGAGAAACGTATGTTGCAGGAAGCCGTGGATTCGCTGTTCGACAATTCGCGGAAGTCGAGCGCGGTAAAAACCGACGCCAACCGCCCGTTGAAATCGCTTTCCGACTCGCTGAAAGGAAAACAGGGACGTTTCCGTCAGAACCTGCTCGGTAAACGTGTCGACTATTCGGCCCGTTCGGTAATCGTAGTAGGTCCCGAGCTTAAAATGCACGAATGCGGTTTGCCTAAAGACATGGCGGCCGAACTCTATAAACCGTTTGTAATCCGCAAGCTCATCGAGCGCGGAATTGTAAAAACGGTAAAATCGGCGAAGAAAATCGTCGATCGTAAGGACCCGGTGATCTGGGATATTTTGGAGTACGTGATGAAAGGACATCCCGTATTGCTAAACCGCGCCCCGACGCTTCACCGCCTGGGGATCCAGGCGTTCCAGCCGAAAATGATCGAAGGAAAAGCGATTCAGCTTCACCCGCTCTCGTGTACGGCGTTCAACGCCGACTTCGACGGCGACCAGATGGCGGTTCACCTTCCGCTCGGAAACGAAGCCATTCTGGAAGCGCAGATGTTGATGCTTGCTTCGCACAATATCCTGAACCCGGCCAATGGCGCTCCTATTACCGTTCCTTCGCAGGACATGGTGCTCGGTTTGTATTATATTACCAAACCACGCAAGGGAGCTAAGGGAGAAGGTCTTATTTTCTATTCCCCCGAAGAAGCCGAGATTGCTTACAACGAGAAAAAAGTAGCACTTCATGCTCCGATCAAGGTTCGTACCTTCGATATCGACGAAGATGGCGATCCCATCGAAAAACTGATCGACACGACGGTTGGACGTATCTTGTTTAACAAATGCGTGCCTTCGGAAGTAGGTTATATTAACGAACTGCTTTCCAAAAAGTCGCTCCGCGATATCATCGGGGTGGTGATTGAAAAATGCGGGGTTGCCCGCACCGCCCAGTTCCTCGACGATATCAAGGATCTCGGCTATTACATGGCCTTCAAGGGTGGTTTGTCGTTTAACTTGGGTGACGTTATCATCCCGGTTGAAAAAGAAGAACTGGTAAAAGAAGGTAACGCCGAAGTGGAAGAAATTACGAATCTCTACAACATGGGATTCATTACCAACAAAGAACGTTACAATCAGGTGATCGACACCTGGACGCACGTGAACTCCAAGCTGTCGAACATCCTGATGAAACAGCTGGCCGGCGATAACCAGGGCTTCAACTCGGTATACATGATGTTGGATTCGGGTGCCCGTGGTTCGAAGGAGCAGATTCGTCAGCTCTCGGGTATGCGTGGTCTGATGGCCAAACCGCAGAAGTCGGGTGCCGAAGGAGGTCAGATTATCGAGAACCCGATTCTTTCGAACTTTAAGGAAGGTTTGTCGGTGCTCGAGTACTTTATCTCTACCCACGGTGCGCGTAAGGGTCTTGCCGATACTGCGCTGAAAACGGCGGATGCGGGTTATCTGACCCGTCGTCTGGTCGACGTATCGCAGGATGTGATCATCAATGAGGATGATTGCGGAACCTTGCGTGGTTTGGTGGCTACCGAGATGAAGAACAACGAAGAAGTTATTTCCAGCTTGTACGAGCGTATCCTCGGCCGTGTTTCGGTGCATGATGTGTATCATCCGCTGACGGGCGAATTGATCGTTGCTTCGGGTGAGCAGATTACCGAGCCGCTGGCACGTAAGATTCAGGATTCGCCGATCGAACGTGTTGAAATTCGTTCGGTACTGACTTGTGAATCGAAAAAAGGGGTGTGTGCAAAATGTTACGGCCGTAACCTGGCTACCGGTAAAATGGTGCATATGGGCGAGGCAGTAGGGGTTATTGCAGCGCAATCGATCGGTGAGCCGGGAACACAGCTTACCCTGCGTACTTTCCACGTTGGGGGGATTGCTTCGAACATTGCTGCCGAATCGAAAATCGCTCTTCGTTACGACGGACGGTTGGAATTTGATGAGTTGCGTACTGTTCCGTCCTCGGATGAGAGCGGTAATCAGTACGAAGTGGTGGTGAGCCGTCTGACCGAAATGCGTGTAATCGATCCGAATACCGGTATTACGCTCACTTCGCAGAACGTACCTTACGGTTCGAAACTGTATGCCAAAAACGGAGATACAGGTACCAAGGGACAGGTAATCTGCGAGTGGGACCCGTTCAACGCCGTAATTATTTCGGAAAACGACGGGCGCATCGAATTCGAAGATGTAGTTGAAAACGTAACGTTCAAAACCGATATCGACGATGCAACAGGATTGCGTGAGAAAATCATTATCGAATCGAAAGATCGTAATAAAGTTCCTACGGCCCGTATTATAGGTACCGATGGTAATCCGCTGCGTACGTACAACCTACCGGTGGGAGCTCACTTGGTGATCGATAATGGCGATGCCATCAAGGCAGGTCAGATCTTGGTAAAGATTCCGCGTGCAGTAGGTAAAACCGGTGACATTACAGGGGGTCTTCCCCGTGTTACCGAGCTGTTCGAAGCCCGTAACCCGTCGAACCCGGCCGTTGTGGCCGAAATCGATGGTGAAGTAAGCTTCGGGAAGATCAAGCGTGGTAACCGCGAACTTACTGTGACTTCCAAGACCAATCAGGAAAAGAAATACATGATTCCGCTGTCGAAACAGATTCTGGTGCAGGAAAACGACTTTGTCCGTGCCGGTACGCCGCTGTCCGACGGAGCCATCACTCCGGCCGATATTCTGATGATTAAGGGTCCTACGGCTGTTCAGGACTATATTGTAAATGAAGTTCAGGACGTATACCGTTTGCAGGGTGTGAAAATCAACGACAAGCATTTCGAAGTGATTGTTCGTCAGATGATGCGGAAAGTGGAGATTATCGAACAGGGCGATACGCGCTTCCTTGAAAAACAGATCGTTGATAAAAACGAGTTTATGGAGGAAAACGACCGTATCTGGGGTAAGAAGATCGTTGTGGAAGCCGGTGATTCGGCCAATCTCAAGAAAGGTCAGATCATCACTCCCCGTAAGCTCCGCGATGAAAACAGCGCGCTGAAACGGCGCGACCTGCGGTTGGTGGTAACCCGTGATGCAGTACCTGCTACTTCGAGTCAGATTCTCCAGGGTATTACCCGTGCGGCGCTGCAAACGAATAGTTTCATGTCGGCGGCTTCTTTCCAGGAAACCACCAAGGTATTGAACGATGCTGCGATCAATGGAAAAGTGGATCGTCTGGAAGGATTGAAGGAAAATGTGATTTGTGGTCACTTGATTCCTGCCGGTACAGGTCAGCGCGAGTTCGATAAATTGATTGTTTATTCGCGCGACGAATACGACAAAAAAGTAGACGCCCGCCGTAATGTGCTCGACATGGAAGAAGGCAATCCAGCCTGA
PROTEIN sequence
Length: 1431
MAFKTDNKLKSNFNKISIGLASPEEILKLSSGEVLKPETINYRTYKPERDGLFCERIFGPTKDFECHCGKYKRIRYKGIVCDRCGVEVTEKKVRRERMGHIQLVVPVAHIWYFRSLPNKIGYLLGMPTKKLDAIIYYEKYVIIQAGIAANGENIVDGELITEEEYLDIMDTLPRENQLLEDNDPNKFVAKMGAEAILDLLQRLNLDDLSYELRDKANNDSSQQRKNDALKRLQIVESFRASQHRNKPEWMVVKIVPVIPPELRPLVPLDGGRFATSDLNDLYRRVIIRNNRLKRLIEIKAPEVILRNEKRMLQEAVDSLFDNSRKSSAVKTDANRPLKSLSDSLKGKQGRFRQNLLGKRVDYSARSVIVVGPELKMHECGLPKDMAAELYKPFVIRKLIERGIVKTVKSAKKIVDRKDPVIWDILEYVMKGHPVLLNRAPTLHRLGIQAFQPKMIEGKAIQLHPLSCTAFNADFDGDQMAVHLPLGNEAILEAQMLMLASHNILNPANGAPITVPSQDMVLGLYYITKPRKGAKGEGLIFYSPEEAEIAYNEKKVALHAPIKVRTFDIDEDGDPIEKLIDTTVGRILFNKCVPSEVGYINELLSKKSLRDIIGVVIEKCGVARTAQFLDDIKDLGYYMAFKGGLSFNLGDVIIPVEKEELVKEGNAEVEEITNLYNMGFITNKERYNQVIDTWTHVNSKLSNILMKQLAGDNQGFNSVYMMLDSGARGSKEQIRQLSGMRGLMAKPQKSGAEGGQIIENPILSNFKEGLSVLEYFISTHGARKGLADTALKTADAGYLTRRLVDVSQDVIINEDDCGTLRGLVATEMKNNEEVISSLYERILGRVSVHDVYHPLTGELIVASGEQITEPLARKIQDSPIERVEIRSVLTCESKKGVCAKCYGRNLATGKMVHMGEAVGVIAAQSIGEPGTQLTLRTFHVGGIASNIAAESKIALRYDGRLEFDELRTVPSSDESGNQYEVVVSRLTEMRVIDPNTGITLTSQNVPYGSKLYAKNGDTGTKGQVICEWDPFNAVIISENDGRIEFEDVVENVTFKTDIDDATGLREKIIIESKDRNKVPTARIIGTDGNPLRTYNLPVGAHLVIDNGDAIKAGQILVKIPRAVGKTGDITGGLPRVTELFEARNPSNPAVVAEIDGEVSFGKIKRGNRELTVTSKTNQEKKYMIPLSKQILVQENDFVRAGTPLSDGAITPADILMIKGPTAVQDYIVNEVQDVYRLQGVKINDKHFEVIVRQMMRKVEIIEQGDTRFLEKQIVDKNEFMEENDRIWGKKIVVEAGDSANLKKGQIITPRKLRDENSALKRRDLRLVVTRDAVPATSSQILQGITRAALQTNSFMSAASFQETTKVLNDAAINGKVDRLEGLKENVICGHLIPAGTGQREFDKLIVYSRDEYDKKVDARRNVLDMEEGNPA*