ggKbase home page

scnpilot_p_inoc_scaffold_21_curated_121

Organism: scnpilot_dereplicated_Paludibacter_1

near complete RP 51 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: comp(153117..153638)

Top 3 Functional Annotations

Value Algorithm Source
Ribosome maturation factor RimM n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T4L2_PALPW similarity UNIREF
DB: UNIREF100
  • Identity: 61.8
  • Coverage: 173.0
  • Bit_score: 222
  • Evalue 4.70e-55
16S rRNA processing protein rimm; K02860 16S rRNA processing protein RimM similarity KEGG
DB: KEGG
  • Identity: 61.8
  • Coverage: 173.0
  • Bit_score: 222
  • Evalue 1.50e-55
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00055369}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 61.8
  • Coverage: 173.0
  • Bit_score: 222
  • Evalue 6.50e-55

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Paludibacter propionicigenes → Paludibacter → Bacteroidales → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 522
ATGATACTCAAAGACGAACTGATTCCTATCGGGCAGGTACTTAAACCTCATGGTATTCACGGTGAAATGGTGTTCGAATTTACTTCCGACATTTTCGAGCGCGAAGAAGTCCCGTTTTTTATTGTCGAAATCGACGGGATTTTTGTTCCCTTCCGCGTCGAAAATTACCGGATGCGATCGTCGTCGACCGCGCTGATTCAGCTGAAGGGAGTGACCTCCGACGAGAAAGCGCGCGGTTTTTCGGGCCTTACCATTTATATCGCATCGCATTATTTGTCCGAAATGGACGATCGGGAGGTGGAGGCCGGCTATTTCGAGGGCTTTCAGCTGGTGGATGAGCACGAAGGTGTGCTGGGCCTTATTTCGGAAGTCGATCAGACGACCGAAAATGCCCTGTTCGTGGTTCCTGTGAGCGACGACGACGAATTGTTGATTCCTGTGAGCGACGAGTATATCGTACACATCGATCACGAACTCCGGATCATACGGGTGAATTTGCCCGAAGGATTGCTCGATTTGTAA
PROTEIN sequence
Length: 174
MILKDELIPIGQVLKPHGIHGEMVFEFTSDIFEREEVPFFIVEIDGIFVPFRVENYRMRSSSTALIQLKGVTSDEKARGFSGLTIYIASHYLSEMDDREVEAGYFEGFQLVDEHEGVLGLISEVDQTTENALFVVPVSDDDELLIPVSDEYIVHIDHELRIIRVNLPEGLLDL*