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SCNpilot_expt_1000_bf_scaffold_1344_curated_10

Organism: scnpilot_dereplicated_Rhizobium_2

partial RP 36 / 55 MC: 4 BSCG 36 / 51 MC: 5 ASCG 9 / 38 MC: 1
Location: comp(8596..9909)

Top 3 Functional Annotations

Value Algorithm Source
ABC-type xylose transport system, permease component n=1 Tax=Rhizobium sp. CF080 RepID=J3BCX7_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 83.4
  • Coverage: 441.0
  • Bit_score: 741
  • Evalue 5.80e-211
Sugar ABC transporter permease {ECO:0000313|EMBL:KGE01247.1}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. YS-1r.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.0
  • Coverage: 441.0
  • Bit_score: 755
  • Evalue 4.10e-215
inner-membrane translocator; K10544 D-xylose transport system permease protein similarity KEGG
DB: KEGG
  • Identity: 82.4
  • Coverage: 442.0
  • Bit_score: 731
  • Evalue 1.90e-208

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Taxonomy

Rhizobium sp. YS-1r → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1314
ATGGCCGATACGCTACAATCCAGCACATCCGGCGGCGCCCGCCAGGCGGAAGCCAACCCGGTGACGCGCTTCTTTCGCGCGACCGAAATCGATACCCGCCTGCTCGGCATGGTCGGCGCGCTGCTGATCATCTGGGTCGGTTTTCACATCATGACCGGCGGCCTGTTCCTGACGCCGCGCAACCTCTGGAACCTCTCGGTGCAGACCGCGTCGGTGGCCGTGATGGCGACGGGCATGGTGCTGGTCATCGTCACTCGCAACATCGACCTGTCGGTCGGCTCGATCCTCGGGTTTTCCGGCATGATCATGGGCGTGCTGCAGGCGCAGATGCTGCCGCAGCTGATGGGCTTCAACCATCCTGCCACCTGGGTCGTGGCGCTGGCCGGCGGTCTCCTTGTCGGCGCCGCGATCGGCGCGCTGCACGGCTCGATCATCGCCTTCCTCAACGTACCGTCCTTCATCGTCACCCTCGGCGGCCTGCTCGTCTGGCGCGGCGCCACCTGGTTCGTTACCAGCGGGCAGACGGTCGCGCCGATGAATGCCAGCTTCCGCCTGATGGGCGGCGGAACCGAAGGCTCGATCGGCGCCACGGCCAGCTGGGTGGTCGGCGCTCTCGCCTGCATGGCCATCGTCGTCGCCATCATCAATGCCCGCCAGCAGCGCAAGCGCTTCCACTTCCCGCGCCGGCCGCTCTGGGCGGAATATTTCCTCTGCGTGCTGAGCTGCGCCATCGTCATGGGCGCGATCTTCGTCGCCAACAGCTATTACTGGCCGGTCAACATCGCCCGCAAATATGCCGAGGCGAACAATATTCCCTGGCCGGAAGCCGGGCTGTTCATTCCCCACGGCATCGCCATTCCGGTGCTGATGGCGATTGCGGTCGGTATCGTCATGACCTTCATCGCCACGCGCCTGCGCTTCGGCCGGTATGTCTTCGCCATCGGCGGCAATCCGGAAGCGGCGGAACTGGCCGGCATCAAGACGCGCTGGGTGACGGTGAAGATCTTCACCCTGATGGGCGTGCTCTGCGCCATCGCCTCGGCGATCTCCACCGCCCGCCTCAATGCCGCCACCAATGCGCAGGGCGAACTCGACGAGCTTTACACCATCGCCGCAGCCGTGATCGGCGGCACCTCGCTTGCCGGCGGCACCGGTACCATTGCCGGCGCCATGCTCGGCGCCCTGGTCATGCAGTCGCTGCAGTCGGGCATGGTGCTGCTTGGCATCGACACGCCGTTCCAGCGGATCGTCGTTGGCGTCGTGCTGGTGATGGCCGTCTGGCTCGACACGATCTACCGCGCGCGTGCCAAGTAA
PROTEIN sequence
Length: 438
MADTLQSSTSGGARQAEANPVTRFFRATEIDTRLLGMVGALLIIWVGFHIMTGGLFLTPRNLWNLSVQTASVAVMATGMVLVIVTRNIDLSVGSILGFSGMIMGVLQAQMLPQLMGFNHPATWVVALAGGLLVGAAIGALHGSIIAFLNVPSFIVTLGGLLVWRGATWFVTSGQTVAPMNASFRLMGGGTEGSIGATASWVVGALACMAIVVAIINARQQRKRFHFPRRPLWAEYFLCVLSCAIVMGAIFVANSYYWPVNIARKYAEANNIPWPEAGLFIPHGIAIPVLMAIAVGIVMTFIATRLRFGRYVFAIGGNPEAAELAGIKTRWVTVKIFTLMGVLCAIASAISTARLNAATNAQGELDELYTIAAAVIGGTSLAGGTGTIAGAMLGALVMQSLQSGMVLLGIDTPFQRIVVGVVLVMAVWLDTIYRARAK*