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SCNpilot_expt_1000_bf_scaffold_2009_curated_19

Organism: scnpilot_dereplicated_Rhizobium_2

partial RP 36 / 55 MC: 4 BSCG 36 / 51 MC: 5 ASCG 9 / 38 MC: 1
Location: comp(16895..17611)

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CRM2_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 86.6
  • Coverage: 238.0
  • Bit_score: 409
  • Evalue 2.80e-111
Uncharacterized protein {ECO:0000313|EMBL:EYR78719.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.6
  • Coverage: 238.0
  • Bit_score: 409
  • Evalue 4.00e-111
integral membrane protein similarity KEGG
DB: KEGG
  • Identity: 87.4
  • Coverage: 239.0
  • Bit_score: 404
  • Evalue 1.70e-110

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 717
ATGAATACAAACCCCAGTCGTTTTGGGTATAATCCCGCCGCGCAAAGCCAGGCGGTGTTCGACGAAAGCCTGCGCAAGCACATGCTGCGCGTCTACAACTACATGGGCGCCGGCCTGGTGCTGACCGGCCTCGTCGCCTTCATCGTCAGCTCGACGCCGGCGCTCTACGTGCCGATCTTCTCCACGCCGCTGAAGTGGGTGGTGATGCTGGCGCCGCTCGCCTTCGTCTTCTTCTTCTCGTTCCGCATCCATTCGATGTCGGCGCGCACGGCGCAACTGACCTTCTGGGCCTTCTGCGCCGTCATGGGCCTGTCGCTGGCGTCCGTGTTCCTGGTCTTCACCGGAACCAGCATCGCCCGCACCTTCTTCATCGCCGCGACGATGTTCGGCGCCACCAGCCTCTACGGCTACACCACCAAGCGTGACCTGTCGCAATTCGGCTCGTTCCTGATGATGGGCCTGATCGGCGTCATCATCGCCTCGGTCGTCAACATCTTCCTTGGCTCTTCGGCGCTGCAGTTCGCAATCTCGGTGATCGGCATCGTCGTCTTCGTCGGCCTGACCGCCTGGGACACGCAGAACATCAAGGAACAGTATGCGGAAAACTTCGACCAGGAATCGCAGCACAAGCTCGCCGTCTTCGGCGCCCTGTCGCTCTACCTGAATTTCGTCAATATCTTCCAGTTGCTGTTGTACTTTACGGGCGAGCGCGAGTAA
PROTEIN sequence
Length: 239
MNTNPSRFGYNPAAQSQAVFDESLRKHMLRVYNYMGAGLVLTGLVAFIVSSTPALYVPIFSTPLKWVVMLAPLAFVFFFSFRIHSMSARTAQLTFWAFCAVMGLSLASVFLVFTGTSIARTFFIAATMFGATSLYGYTTKRDLSQFGSFLMMGLIGVIIASVVNIFLGSSALQFAISVIGIVVFVGLTAWDTQNIKEQYAENFDQESQHKLAVFGALSLYLNFVNIFQLLLYFTGERE*