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SCNpilot_expt_500_bf_scaffold_1129_curated_14

Organism: scnpilot_dereplicated_Sphingopyxis_1

near complete RP 50 / 55 BSCG 49 / 51 ASCG 10 / 38
Location: 8782..9189

Top 3 Functional Annotations

Value Algorithm Source
DNA repair protein RadC n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WEU7_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 90.4
  • Coverage: 135.0
  • Bit_score: 243
  • Evalue 1.50e-61
DNA repair protein RadC {ECO:0000313|EMBL:ENY81976.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.4
  • Coverage: 135.0
  • Bit_score: 243
  • Evalue 2.10e-61
DNA repair protein RadC; K03630 DNA repair protein RadC similarity KEGG
DB: KEGG
  • Identity: 41.7
  • Coverage: 132.0
  • Bit_score: 101
  • Evalue 3.00e-19

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Taxonomy

Sphingopyxis sp. MC1 → Sphingopyxis → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 408
ATGGCCGGGCTGCGCGAGCAAATCGCGCGCAGCCCGGTACATGCCGGCGATTCACGGCTGCACGATTATTTGCTGATCCAACTGAACGACGCTCCGACCGAGCGACTTCATGCGATCTTTGTCGACAGCGTTTCCGACTATATAGCTGACGAACAGATCGCCGACGGGACGATCACCCACGTCTCCGCGTCGCTGCGTGCGCTTCTCGCGCATGCCTTCGAGGCGGGTGCGCACGGTGTGCTCCTCGCGCATAATCATCCGTCGGGGTCGAGCGAGCCGAGCGCTGCCGACGAGGCGTTCACCGCCAAGATCGGCGGACTGCTTGCCGCGGTCGATATTCGCTTGCACGATCATCTGATCGTCGGTGGTGGCCGCGTCGTCAGCATGCGCGCAAGGGGGCTGCTATGA
PROTEIN sequence
Length: 136
MAGLREQIARSPVHAGDSRLHDYLLIQLNDAPTERLHAIFVDSVSDYIADEQIADGTITHVSASLRALLAHAFEAGAHGVLLAHNHPSGSSEPSAADEAFTAKIGGLLAAVDIRLHDHLIVGGGRVVSMRARGLL*