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SCNpilot_expt_500_bf_scaffold_1129_curated

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_1129_curated_1
BJP_08E140C01_10KDA_Sphingopyxis_64_55, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..293
DNA (291bp) protein (97aa)
GTP cyclohydrolase I; K01495 GTP cyclohydrolase I [EC:3.5.4.16]
GTP cyclohydrolase 1 n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GRU9_SPHAL
Tax=BJP_08E140C01_10KDA_Sphingopyxis_64_55
SCNpilot_expt_500_bf_scaffold_1129_curated_2
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

293..1285
DNA (993bp) protein (331aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UU04_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:ENY81965.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
hypothetical protein; K06955
SCNpilot_expt_500_bf_scaffold_1129_curated_3
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1260..1715)
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WET5_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:ENY81966.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_1129_curated_4
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1839..3329
DNA (1491bp) protein (497aa)
amine oxidase; K10027 phytoene desaturase [EC:1.3.99.26 1.3.99.28 1.3.99.29 1.3.99.31]
Amine oxidase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W344_9SPHN
Amine oxidase {ECO:0000313|EMBL:ENY81967.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
SCNpilot_expt_500_bf_scaffold_1129_curated_5
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3334..3942
DNA (609bp) protein (203aa)
RNA polymerase sigma factor n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WDY9_9SPHN
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
ECF subfamily RNA polymerase sigma-70 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
SCNpilot_expt_500_bf_scaffold_1129_curated_6
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3935..4603
DNA (669bp) protein (223aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UUJ0_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:ENY81969.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_1129_curated_7
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4688..5233
DNA (546bp) protein (182aa)
Beta-Ig-H3/fasciclin n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UU08_9SPHN
Beta-Ig-H3/fasciclin {ECO:0000313|EMBL:ENY81970.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
beta-Ig-H3/fasciclin
SCNpilot_expt_500_bf_scaffold_1129_curated_8
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5295..5645)
DNA (351bp) protein (117aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WEU2_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:ENY81971.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
SCNpilot_expt_500_bf_scaffold_1129_curated_9
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5649..5993)
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W349_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:ENY81972.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_1129_curated_10
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5990..6418)
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WDZ4_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:ENY81973.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_1129_curated_11
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6487..7044
DNA (558bp) protein (186aa)
TetR family transcriptional regulator n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UUJ6_9SPHN
TetR family transcriptional regulator {ECO:0000313|EMBL:ENY81974.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
TetR family transcriptional regulator
SCNpilot_expt_500_bf_scaffold_1129_curated_12
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7443..7985
DNA (543bp) protein (181aa)
Two component LuxR family transcriptional regulator n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UU13_9SPHN
Two component LuxR family transcriptional regulator {ECO:0000313|EMBL:ENY81975.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
two component LuxR family transcriptional regulator
SCNpilot_expt_500_bf_scaffold_1129_curated_13
Sphingopyxis sp. LC81, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8168..8665
DNA (498bp) protein (166aa)
Uncharacterized protein n=1 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0J912_9SPHN
Putative membrane protein {ECO:0000313|EMBL:KGB54017.1}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC81.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_1129_curated_14
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8782..9189
DNA (408bp) protein (136aa)
DNA repair protein RadC n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WEU7_9SPHN
DNA repair protein RadC {ECO:0000313|EMBL:ENY81976.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
DNA repair protein RadC; K03630 DNA repair protein RadC
SCNpilot_expt_500_bf_scaffold_1129_curated_15
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9186..9611
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W355_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:ENY81977.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
MarR family transcriptional regulator
SCNpilot_expt_500_bf_scaffold_1129_curated_16
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10092..11384
DNA (1293bp) protein (431aa)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase; K00528 ferredoxin--NADP+ reductase [EC:1.18.1.2]
FAD-dependent pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WDZ9_9SPHN
FAD-dependent pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:ENY81978.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
SCNpilot_expt_500_bf_scaffold_1129_curated_17
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11381..11773
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UUK0_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:ENY81979.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_1129_curated_18
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11807..13066)
DNA (1260bp) protein (420aa)
membrane dipeptidase; K01273 membrane dipeptidase [EC:3.4.13.19]
Membrane dipeptidase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UU17_9SPHN
Membrane dipeptidase {ECO:0000313|EMBL:ENY81980.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
SCNpilot_expt_500_bf_scaffold_1129_curated_19
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14075..14305
DNA (231bp) protein (77aa)
acyl-CoA dehydrogenase-like protein; K00249 acyl-CoA dehydrogenase [EC:1.3.99.3]
Acyl-CoA dehydrogenase-like protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WEV2_9SPHN
Acyl-CoA dehydrogenase-like protein {ECO:0000313|EMBL:ENY81981.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
SCNpilot_expt_500_bf_scaffold_1129_curated_20
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14302..15528
DNA (1227bp) protein (409aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W360_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:AJA10626.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis fribergensis.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_1129_curated_21
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16002..16757
DNA (756bp) protein (252aa)
peptidase M20D, amidohydrolase; K01451 hippurate hydrolase [EC:3.5.1.32]
Peptidase M20D, amidohydrolase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WE05_9SPHN
Peptidase M20D, amidohydrolase {ECO:0000313|EMBL:ENY81983.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
SCNpilot_expt_500_bf_scaffold_1129_curated_22
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17000..18586)
DNA (1587bp) protein (529aa)
L-aspartate oxidase {ECO:0000256|RuleBase:RU362049}; EC=1.4.3.16 {ECO:0000256|RuleBase:RU362049};; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
L-aspartate oxidase; K00278 L-aspartate oxidase [EC:1.4.3.16]
L-aspartate oxidase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UUK4_9SPHN
SCNpilot_expt_500_bf_scaffold_1129_curated_23
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18579..19502)
DNA (924bp) protein (308aa)
ABC transporter n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UU23_9SPHN
ABC transporter {ECO:0000313|EMBL:ENY81985.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
ABC transporter; K09687 antibiotic transport system ATP-binding protein
SCNpilot_expt_500_bf_scaffold_1129_curated_24
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19613..20188
DNA (576bp) protein (192aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WEV7_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:ENY81986.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_1129_curated_25
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20260..20463
DNA (204bp) protein (68aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W366_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:ENY81987.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_1129_curated_26
unknown

Not on your lists

comp(20584..20721)
DNA (138bp) protein (46aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1129_curated_27
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20908..21093
DNA (186bp) protein (62aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WE09_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:ENY81988.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
SCNpilot_expt_500_bf_scaffold_1129_curated_28
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21100..21771)
DNA (672bp) protein (224aa)
Putative phage repressor n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UUK8_9SPHN
Putative phage repressor {ECO:0000313|EMBL:ENY81989.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
putative phage repressor
SCNpilot_expt_500_bf_scaffold_1129_curated_29
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21885..22142
DNA (258bp) protein (86aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UU29_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:ENY81990.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_1129_curated_30
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22139..22450
DNA (312bp) protein (104aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WEW3_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:ENY81991.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
hypothetical protein
Displaying items 1-30 of 35 in total

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