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SCNpilot_expt_500_bf_scaffold_2070_curated_8

Organism: scnpilot_dereplicated_Sphingopyxis_1

near complete RP 50 / 55 BSCG 49 / 51 ASCG 10 / 38
Location: comp(10340..10906)

Top 3 Functional Annotations

Value Algorithm Source
ECF sigma factor family protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UWZ9_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 188.0
  • Bit_score: 378
  • Evalue 5.50e-102
ECF sigma factor family protein {ECO:0000313|EMBL:ENY82769.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 188.0
  • Bit_score: 378
  • Evalue 7.80e-102
ECF sigma factor family protein similarity KEGG
DB: KEGG
  • Identity: 48.8
  • Coverage: 164.0
  • Bit_score: 162
  • Evalue 1.50e-37

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Taxonomy

Sphingopyxis sp. MC1 → Sphingopyxis → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 567
ATGGCGCGTCATGCGGGGAGATGGGCGATCAACGAGGAACCGGGTCGTGCGGGCAGCATCGACGGCGACGCCGACGCGCTCATCGCCACGCTGTATGACGAACTCAAGATCATCGCGCGCCGCGAACATTATCGCGCGGGCGGCGGACAGACACTGCAAACGACGGCGCTGGTTTCGGAAGCCTATCTGAAACTGAGCAAACGCAACGACTGGGAAAGCGAACGCCACTTCCTCGGCTGCGCGGCGACCGCCATCCGCCACATCCTGATCGACGCCGCGCGCGCCCGCATGACGGCGAAGCGTGGCGCGGGCGACTATGCCTTTACCGAAAGCCTCGATTCGCTCGCCGCGGCGGCGCCCGAGGACGAGGATGTCGTGCGGCTGGGTGAGGCGTTGCAACGGCTGGCGCGCCTCGACCCCAATCTCGCGCAACTGATCGACTGCCGCTTCTTCGCCGGGATGACCGAAGAGGAGACCGCAAAGGTCCTGGGCGTCAGCGACCGGACGGTGCGCCGCTGGTGGCTCCAGGCGCGGGCCTGGGTGCACAAGGAAATGGACGCGGGCTAG
PROTEIN sequence
Length: 189
MARHAGRWAINEEPGRAGSIDGDADALIATLYDELKIIARREHYRAGGGQTLQTTALVSEAYLKLSKRNDWESERHFLGCAATAIRHILIDAARARMTAKRGAGDYAFTESLDSLAAAAPEDEDVVRLGEALQRLARLDPNLAQLIDCRFFAGMTEEETAKVLGVSDRTVRRWWLQARAWVHKEMDAG*