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SCNpilot_expt_500_bf_scaffold_2070_curated

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_2070_curated_1
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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557..934
DNA (378bp) protein (126aa)
Acetyl-coenzyme A synthetase {ECO:0000256|HAMAP-Rule:MF_01123}; Short=AcCoA synthetase {ECO:0000256|HAMAP-Rule:MF_01123};; Short=Acs {ECO:0000256|HAMAP-Rule:MF_01123};; EC=6.2.1.1 {ECO:0000256|HAMAP-Rule:MF_01123};; Acetate--CoA ligase {ECO:0000256|HAMAP-Rule:MF_01123}; Acyl-activating enzyme {ECO:0000256|HAMAP-Rule:MF_01123}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
acetyl-coenzyme A synthetase (EC:6.2.1.1); K01895 acetyl-CoA synthetase [EC:6.2.1.1]
Acetyl-coenzyme A synthetase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W5G1_9SPHN
SCNpilot_expt_500_bf_scaffold_2070_curated_2
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1081..1536
DNA (456bp) protein (152aa)
LuxR family two component transcriptional regulator n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WH51_9SPHN
LuxR family two component transcriptional regulator {ECO:0000313|EMBL:ENY82776.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
two component LuxR family transcriptional regulator
SCNpilot_expt_500_bf_scaffold_2070_curated_3
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1510..4125)
DNA (2616bp) protein (872aa)
Multi-sensor hybrid histidine kinase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UWH3_9SPHN
Multi-sensor hybrid histidine kinase {ECO:0000313|EMBL:ENY82775.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
multi-sensor hybrid histidine kinase
SCNpilot_expt_500_bf_scaffold_2070_curated_4
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5159..6460
DNA (1302bp) protein (434aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WGH1_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:ENY82773.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
cell wall anchor domain-containing protein
SCNpilot_expt_500_bf_scaffold_2070_curated_5
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6457..7311
DNA (855bp) protein (285aa)
Outer membrane protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W5F8_9SPHN
Outer membrane protein {ECO:0000313|EMBL:ENY82772.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
SCNpilot_expt_500_bf_scaffold_2070_curated_6
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7341..7907
DNA (567bp) protein (189aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WH50_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:ENY82771.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
SCNpilot_expt_500_bf_scaffold_2070_curated_7
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7968..10343
DNA (2376bp) protein (792aa)
serine/threonine protein kinase (EC:2.7.11.1); K08282 non-specific serine/threonine protein kinase [EC:2.7.11.1]
Serine/threonine protein kinase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UWG9_9SPHN
Serine/threonine protein kinase {ECO:0000313|EMBL:ENY82770.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
SCNpilot_expt_500_bf_scaffold_2070_curated_8
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10340..10906)
DNA (567bp) protein (189aa)
ECF sigma factor family protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UWZ9_9SPHN
ECF sigma factor family protein {ECO:0000313|EMBL:ENY82769.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
ECF sigma factor family protein
SCNpilot_expt_500_bf_scaffold_2070_curated_9
unknown

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10923..11675
DNA (753bp) protein (251aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_2070_curated_10
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12644..12829
DNA (186bp) protein (62aa)
YadA domain-containing protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W5F4_9SPHN
YadA domain-containing protein {ECO:0000313|EMBL:ENY82767.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
SCNpilot_expt_500_bf_scaffold_2070_curated_11
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12900..13658)
DNA (759bp) protein (253aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WH45_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:ENY82766.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
SCNpilot_expt_500_bf_scaffold_2070_curated_12
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13664..14176)
DNA (513bp) protein (171aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UWG5_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:ENY82765.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
SCNpilot_expt_500_bf_scaffold_2070_curated_13
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14173..14904)
DNA (732bp) protein (244aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UWZ4_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:ENY82764.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
SCNpilot_expt_500_bf_scaffold_2070_curated_14
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14904..15821)
DNA (918bp) protein (306aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WGG3_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:ENY82763.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
SCNpilot_expt_500_bf_scaffold_2070_curated_15
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15826..16578)
DNA (753bp) protein (251aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W5F0_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:ENY82762.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
SCNpilot_expt_500_bf_scaffold_2070_curated_16
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16754..19474
DNA (2721bp) protein (907aa)
Putative CadC family transcriptional regulator n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WH42_9SPHN
Putative CadC family transcriptional regulator {ECO:0000313|EMBL:ENY82761.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
putative CadC family transcriptional regulator
SCNpilot_expt_500_bf_scaffold_2070_curated_17
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19653..21002
DNA (1350bp) protein (450aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UWG0_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:ENY82760.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
SCNpilot_expt_500_bf_scaffold_2070_curated_18
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21162..22079
DNA (918bp) protein (306aa)
Alpha/beta hydrolase family protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UWY8_9SPHN
Alpha/beta hydrolase family protein {ECO:0000313|EMBL:ENY82759.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
alpha/beta hydrolase family protein
SCNpilot_expt_500_bf_scaffold_2070_curated_19
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22302..22646
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WGG1_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:ENY82758.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_2070_curated_20
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22629..22805)
DNA (177bp) protein (59aa)
Transcriptional regulator n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W5E7_9SPHN
Transcriptional regulator {ECO:0000313|EMBL:ENY82757.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
Displaying 20 items

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