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SCNpilot_expt_500_bf_scaffold_2161_curated_10

Organism: scnpilot_dereplicated_Sphingopyxis_1

near complete RP 50 / 55 BSCG 49 / 51 ASCG 10 / 38
Location: 11393..11524

Top 3 Functional Annotations

Value Algorithm Source
Sigma-70 family RNA polymerase sigma factor n=1 Tax=Sphingobium yanoikuyae ATCC 51230 RepID=K9CP58_SPHYA similarity UNIREF
DB: UNIREF100
  • Identity: 65.1
  • Coverage: 43.0
  • Bit_score: 62
  • Evalue 9.20e-08
Sigma-70 family RNA polymerase sigma factor {ECO:0000313|EMBL:EKU74089.1}; TaxID=883163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae ATCC 51230.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.1
  • Coverage: 43.0
  • Bit_score: 62
  • Evalue 1.30e-07

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Taxonomy

Sphingobium yanoikuyae → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 132
ATGCATCGGCTGCGCCGCCAGACCTACCGCGAAATCGCCGCAGAAATCGGCATCCGGGAACAGGGGGTCGAATATCATATGATGCGCGCGCTCTCGCGATGTCGGAAGGCGGTGGCATTTCAGCGGTGGTGA
PROTEIN sequence
Length: 44
MHRLRRQTYREIAAEIGIREQGVEYHMMRALSRCRKAVAFQRW*