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SCNpilot_bf_inoc_scaffold_1975_curated_8

Organism: scnpilot_dereplicated_Xanthomonadales_1

near complete RP 52 / 55 BSCG 50 / 51 MC: 1 ASCG 11 / 38
Location: 4470..8624

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.5
  • Coverage: 999.99
  • Bit_score: 2344
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 84.7
  • Coverage: 999.99
  • Bit_score: 2343
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta n=1 Tax=Dyella ginsengisoli RepID=UPI0003462B2D similarity UNIREF
DB: UNIREF100
  • Identity: 85.2
  • Coverage: 999.99
  • Bit_score: 2364
  • Evalue 0.0

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Taxonomy

Rhodanobacter spathiphylli → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 4155
ATGACGACCTATTCCTTCACCGAAAAGAAGCGCATCCGCAAGGATTTCGGCAAACGTCCACCGGTACTCGGTGTGCCCAACCTGCTGACGATCCAGACCGATTCCTACAAGGATTTCCTGCAGGCCGAGGCCGCCCCGAGCAGGCGCGAAGACAAGGGCCTGGAAGCCGCGTTGAAGTCGGTGTTCCCGATCAAGAGCCATTCGGGGAACGCGGAACTGGAATTCGTCGATTACCACTTCGGCGAGCCCGCATTCGACGAACGCGAGTGCCGCGTGCGTGGCATGAGCTACGGCGCGCCGCTGCGCGTCAAGGTGCGCCTGGTCATCTACGACAAGGACAGCCCGGCCTCCAAGAAGGTGCCGAAGCTGATGAAGGAACAGGAGGTCTACATGGGCGAAATCCCGCTCATGACCGAGACCGGCACCTTCATCGTGAACGGCACCGAGCGCGTGATCGTTTCGCAGCTGCACCGTTCGCCCGGCGTGTTCTTCGACCACGACAAGGGCAAGCAACATTCGTCGGGCAAGCTGCTGTTCAACGCGCGGGTGATCCCGTATCGCGGTTCGTGGCTCGATTTCGAATTCGATCCGAAGGAAGTGCTGTTCACCCGCATCGACCGCCGCCGCAAGCTGCCGGTGACGATCCTGCTGCGTGCGCTCGGTTATACCAACGAAGAGATGCTGGACATCTTCTTCGAGCACAACGTGTTCCACCTCGGCAAGGAAGGCCACGCGGAGCTCGCGCTGGTGCCCGAGCGCCTGCGCGGCGAAACCCTGAACTTCGACCTCGTTGCCGGCGACAAGGTGCTGGTCGAGAAGGACAAGCGCATCACCGCGCGCCACGTGCGCGAGCTGAAGAACGCCAAGATCACCACGCTGGAAGTGCCGGACGACTACATGGTCGGCCGCATCCTCGCCAACGACATCGTCGATGCGAAGACCGGCGAGCTGCTGGCCTCGGCCAACGACGAGCTGACTGCCGAGCACATCGCCAAGTTCCGCGAAGCCGGCATCGACACGATCGCGACGTTGTTCGTGAACGACCTCGACCGCGGCCCGTACATCTCCAACACCCTGCGTGCCGATCCGACCCGCACCCAACTGGAGGCGCTGGTCGAAATCTACCGGATGATGCGTCCGGGCGAGCCGCCGACGAAAGAGGCGGCGCAGAACCTGTTCCACAACCTGTTCTTCACCTTCGAGCGCTACGACTTGTCGACGGTCGGCCGCATGAAGTTCAACCGCCGCGTCGGGCGAGATTCGGTGACGGGTCCGGCGGTGCTGTACGACCATCGCTACTTCTCGACCCGCAAGGAAGAGGATGCGGTCAAGCTGGTGGAAACGCAGGGCGACACCTCCGACATCCTCGATGTGCTGCGCGTCCTCATCGAGATCAAGAACGGCCACGGCACCGTGGACGACATCGACCACCTCGGCAACCGCCGCGTGCGCAGCGTCGGCGAGATGGCCGAGAACGCGTTCCGCATCGGCCTGGTGCGCGTCGAGCGTGCGGTCAAGGAGCGCCTGTCGCTGGCCGAAGCCGACAACCTCGGCCCGCAGGACCTCATCAACGCCAAGCCGGTCGCGGCGGCGGTGAAGGAGTTCTTCGGTTCGTCGCAGTTGTCGCAGTTCATGGACCAGAACAACCCGCTGTCGGAAGTCACCCACAAGCGCCGTGTGTCGGCGCTGGGGCCCGGCGGCCTCACGCGCGAGCGCGCAGGCTTCGAGGTGCGCGACGTGCACCCGACCCACTACGGCCGCGTCTGCACCATCGAAACGCCGGAAGGCCCGAACATCGGCCTGATCAACTCGCTGGCCGTGTACGCGCGCACCAACCACTACGGCTTCCTGGAAACGCCGTACCGCAAGGTCGAGAACGGCAAGGTCACCGACAAGGTCGATTACCTGTCGGCAATCGAGGAAGGCAATTACGTGATCGCGCAGGCGAACTCGCCGCTCGACAAGCACGGCAAGTTCACCGAGGAATTCGTGTCCTGCCGTTTCCGCGGCGAGTCCGAGCTGCGCCCGGTGCCCGAGATCAACTACATGGACGTCTCGCCGATGCAGACCGTGTCGGTGGCGGCGGCGCTGGTGCCGTTCCTCGAACACGACGACGCCAACCGCGCGCTGATGGGCGCCAACATGCAGCGCCAGGCCGTGCCGACGCTGCGTTCGGAGAAACCCCTCGTCGGCACCGGCATCGAACGCGCGGTCGCGCGCGATTCCGGCGTCACCATCGCGGCCCGCCGCGGCGGCGTGATCGAGCAGGTCGACGCCGCGCGCATCGTGGTGCGCGTCAACGAGAAGGAAGTCGGCGAGAACGATCCGGGCGTGGACATCTACACGCTCACCAAGTACACCCGTTCCAACCAGAGCACCAACCTGAACCAGCGTCCGCTGGTCAACGTGGGTGACAAGCTTGCGAAGGGCGACGTGCTGGCCGACGGCTCTTCCACCGACCTCGGCGAACTGGCGCTGGGCCAGAACATGCTGGTCGCGTTCATGCCGTGGAACGGCTACAACTTCGAGGACTCGGTGCTGTTGTCCGAGCGCGTGGTGCAGGAAGACCGCTACACCTCGATCCACATCGAGGAATTGACCTGCCAGGCGCGCGACACCAAGCTCGGTCCCGAGGAAATCACCGCCGACATCCCGAACGTGGGCGAGCAGGCGCTGAACCGCCTCGACAAGTCCGGCATCGTCTACATCGGCGCGGAAGTGAAGGTTGGCGACATCCTGGTCGGCAAGGTCACGCCCAAGGGCGAGTCGCAGCTGACGCCGGAAGAAAAGCTGCTGCGCGCGATCTTCGGCGAGAAGGCATCCGACGTGAAGGACAGCTCGCTGCGCGTGCCGCCCGGCATGGACGGCACCGTGATCGACGTGCAGGTGTTTACCCGCGACGGCATCGAGAAGGACGAGCGCGCGAAGCAGATCGAGGAAATGGAAATCCAGCGCGTCCGCAAGGACCTGGACGACCAGTTCCGCATCCTCGAAGGCGCGATCTACGGCCGCCTGCGTTCGCAGCTGGTCGGCAAGCCCGCCAACAACGGTCCGCAGGGGCTGAAGAAGAACGCGGAGATCACCAACGAGTACCTCGACGGCCTGAAGAAGGACGAGTGGTTCAAGGTCAATCCGAAGGACGAGGACACCGCGGAGCTGGTTTCGCGTGCGGCCGAGCAGATCAAGCGCCACAAGGAAGCCTTCGACAAGCGTTTCCGCGAGAAGCAGGCCAAGATCACCGCGGGTGACGACCTCGCCCCGGGCGTGCTGAAGCAGGTCAAGGTGCATCTCGCGGTCCGGCGCCGCATCCAGCCGGGCGACAAGATGGCCGGCCGCCACGGCAACAAGGGCGTGGTCTCGATGATCGCGCCGGTCGAGGACATGCCCTACATGACCGACGGCACGCCGATCGACATCGTGCTGAACCCGCTGGGCGTGCCTTCGCGCATGAACATCGGCCAGATCCTGGAAACCCACCTCGGGTGGGCCGCCAAGGGCCTGGGCGAGAAAATCGGCAAGATGCTGGAAGCGAAGGAGAAGGCCAACAAGGTGCGCGAGTTCCTCAACCGCATCTACAACACCGGCAAGGCCGAGCACCACGTCGACCTGGATACGCTGAAGGATCACGAGATCCTCGATCTCGCGGAGAACCTGAAAGCCGGCGTGCCGATGGCGACGCCGGTGTTCGACGGCGCCGATGAAGCCGAGATCAAGTCCATGCTGAAGCTGGCGGAGCTGCCGGAATCGGGCCAGACCACGCTGTACGACGGCCGCACCGGCGACGCCTTCGACCGTCCGGTCACGGTGGGCTACATGCATTACCTGAAGCTCAACCACCTGGTCGACGACAAGATGCACGCGCGTTCCACCGGCCCGTACTCGCTGGTGACGCAACAACCTTTGGGCGGCCGCGCGCAGTTCGGCGGCCAGCGCTTCGGCGAAATGGAGGTGTGGGCGCTGGAAGCCTACGGCGCGGCCTACACCCTGCAGGAAATGCTGACGGTGAAGTCCGACGACGTGCAGGGCCGCAACCAGATGTACAAGTCCATCGTCGATGGCGAACACAAGATGGCAGCGGGCATGCCCGAATCGTTCAACGTGCTGGTCAAGGAGATCCGCTCGCTGGCGATCGACATGGAGCTGGAAGAGCGGTGA
PROTEIN sequence
Length: 1385
MTTYSFTEKKRIRKDFGKRPPVLGVPNLLTIQTDSYKDFLQAEAAPSRREDKGLEAALKSVFPIKSHSGNAELEFVDYHFGEPAFDERECRVRGMSYGAPLRVKVRLVIYDKDSPASKKVPKLMKEQEVYMGEIPLMTETGTFIVNGTERVIVSQLHRSPGVFFDHDKGKQHSSGKLLFNARVIPYRGSWLDFEFDPKEVLFTRIDRRRKLPVTILLRALGYTNEEMLDIFFEHNVFHLGKEGHAELALVPERLRGETLNFDLVAGDKVLVEKDKRITARHVRELKNAKITTLEVPDDYMVGRILANDIVDAKTGELLASANDELTAEHIAKFREAGIDTIATLFVNDLDRGPYISNTLRADPTRTQLEALVEIYRMMRPGEPPTKEAAQNLFHNLFFTFERYDLSTVGRMKFNRRVGRDSVTGPAVLYDHRYFSTRKEEDAVKLVETQGDTSDILDVLRVLIEIKNGHGTVDDIDHLGNRRVRSVGEMAENAFRIGLVRVERAVKERLSLAEADNLGPQDLINAKPVAAAVKEFFGSSQLSQFMDQNNPLSEVTHKRRVSALGPGGLTRERAGFEVRDVHPTHYGRVCTIETPEGPNIGLINSLAVYARTNHYGFLETPYRKVENGKVTDKVDYLSAIEEGNYVIAQANSPLDKHGKFTEEFVSCRFRGESELRPVPEINYMDVSPMQTVSVAAALVPFLEHDDANRALMGANMQRQAVPTLRSEKPLVGTGIERAVARDSGVTIAARRGGVIEQVDAARIVVRVNEKEVGENDPGVDIYTLTKYTRSNQSTNLNQRPLVNVGDKLAKGDVLADGSSTDLGELALGQNMLVAFMPWNGYNFEDSVLLSERVVQEDRYTSIHIEELTCQARDTKLGPEEITADIPNVGEQALNRLDKSGIVYIGAEVKVGDILVGKVTPKGESQLTPEEKLLRAIFGEKASDVKDSSLRVPPGMDGTVIDVQVFTRDGIEKDERAKQIEEMEIQRVRKDLDDQFRILEGAIYGRLRSQLVGKPANNGPQGLKKNAEITNEYLDGLKKDEWFKVNPKDEDTAELVSRAAEQIKRHKEAFDKRFREKQAKITAGDDLAPGVLKQVKVHLAVRRRIQPGDKMAGRHGNKGVVSMIAPVEDMPYMTDGTPIDIVLNPLGVPSRMNIGQILETHLGWAAKGLGEKIGKMLEAKEKANKVREFLNRIYNTGKAEHHVDLDTLKDHEILDLAENLKAGVPMATPVFDGADEAEIKSMLKLAELPESGQTTLYDGRTGDAFDRPVTVGYMHYLKLNHLVDDKMHARSTGPYSLVTQQPLGGRAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVQGRNQMYKSIVDGEHKMAAGMPESFNVLVKEIRSLAIDMELEER*