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SCNpilot_bf_inoc_scaffold_32_curated_326

Organism: scnpilot_dereplicated_Xanthomonadales_2

near complete RP 52 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: comp(400680..401675)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; TaxID=345309 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Luteibacter.;" source="Luteibacter yeojuensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.0
  • Coverage: 330.0
  • Bit_score: 568
  • Evalue 5.40e-159
DNA-directed RNA polymerase, alpha subunit (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 86.4
  • Coverage: 330.0
  • Bit_score: 563
  • Evalue 3.90e-158
DNA-directed RNA polymerase subunit alpha n=1 Tax=Rudaea cellulosilytica RepID=UPI0003710C20 similarity UNIREF
DB: UNIREF100
  • Identity: 84.5
  • Coverage: 330.0
  • Bit_score: 565
  • Evalue 4.30e-158

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Taxonomy

Luteibacter yeojuensis → Luteibacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 996
ATGGCCCATTCGTCTACCACCGTTCTGCGCGCCCGTGGTATCGGCGTGGAGCGCGTCGGCGCCAATCGCGCCAAGGTGATTGTCGAACCGCTGGAACGCGGTTTCGGCCACACGCTCGGCAATGCGCTGCGCCGCGTGCTGCTGTCGTCCATTCCGGGCGCGGCCATCACGGAAGTCGAGATCGATGGCGTGCTGCATGAGTACACGACCCTGGAAGGTCTGCAGGAGGACGTCATCGAAGTCCTGCTGAACCTCAAGGACGTGGCCATCCGCATGCACGGTCAGGACGAGGCGACCTTGAGCCTGTCCCGCAAGGGCAAGGGTGTCGTCACCGCCGGCGACATCAAGGTCGACCACAACGTCGAGATCGTGAATCCCGACCACGTGATCTGCCACCTGACGAAAGACATCGCGCTCAACATGCGGCTGAAGATCGTCCGCGGCGTCGGCTACCAGCCGGCCACCGCGCGTCGTCTGCCGGAAGAAGAGACGCGTCCGATCGGTCGCCTGCAGCTCGATGCGTCGTTCTGCCCGGTGCGTCGCGTCGCTTATGAAGTCGACGCCGCTCGCGTCGAGCAGCGTACCGACCTTGACAAGCTCGTGCTCGATGTCGAAACCAACGGCACGATCGACGCCGAGGACGCCGTGCGCAAGGCGGCGGAAATCGTGCAGGACCAGCTGTCGGTGTTCGGTGACTTCACGCGTCGCGAAAGCGCCGACACGAAGGCCGAGAAGGGCGGTGTCGATCCGCTGCTGCTGCGTCCGATCGACGATCTGGAACTGACGGTGCGTTCGGCCAACTGCCTCAAGGCCGAGAGCATCTACTACATCGGCGACCTCGTGCAGAAGACCGAAGTCGAGCTGCTCAAGACGCCGAACCTGGGCAAAAAGTCGCTCACCGAGATCAAGGACGTGCTGGGTGCGCGTGGCTTGTCGCTCGGGATGAAGCTCGAGAACTGGCCGCCGATGGGGCTGACCCACGGCATGATGGGCTGA
PROTEIN sequence
Length: 332
MAHSSTTVLRARGIGVERVGANRAKVIVEPLERGFGHTLGNALRRVLLSSIPGAAITEVEIDGVLHEYTTLEGLQEDVIEVLLNLKDVAIRMHGQDEATLSLSRKGKGVVTAGDIKVDHNVEIVNPDHVICHLTKDIALNMRLKIVRGVGYQPATARRLPEEETRPIGRLQLDASFCPVRRVAYEVDAARVEQRTDLDKLVLDVETNGTIDAEDAVRKAAEIVQDQLSVFGDFTRRESADTKAEKGGVDPLLLRPIDDLELTVRSANCLKAESIYYIGDLVQKTEVELLKTPNLGKKSLTEIKDVLGARGLSLGMKLENWPPMGLTHGMMG*