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SCNpilot_expt_1000_bf_scaffold_5073_curated_1

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: 3..1262

Top 3 Functional Annotations

Value Algorithm Source
Drug resistance transporter, EmrB/QacA subfamily n=1 Tax=Thiorhodococcus drewsii AZ1 RepID=G2E188_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 63.4
  • Coverage: 402.0
  • Bit_score: 506
  • Evalue 2.30e-140
  • rbh
Drug resistance transporter, EmrB/QacA subfamily {ECO:0000313|EMBL:EGV31429.1}; TaxID=765913 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiorhodococcus.;" source="Thiorhodococcus drewsii AZ1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.4
  • Coverage: 402.0
  • Bit_score: 506
  • Evalue 3.20e-140
stp2; multidrug resistance protein Stp similarity KEGG
DB: KEGG
  • Identity: 53.3
  • Coverage: 413.0
  • Bit_score: 413
  • Evalue 1.10e-112
  • rbh

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Taxonomy

Thiorhodococcus drewsii → Thiorhodococcus → Chromatiales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1260
GTGGCAAGCGCGCTCGCCACCTCGCTTGCGGTGCTGATCGTCGGCTGTGCCGTTCAGGGCATTGCCGGCGCCCTTGTCATTCCGGGCGCGCTGTCCATTCTCACCCAGGCCTTTCCGGACCCTGCCGCACGCTCCCATGTCATCGGCGGCTGGTCCTCCTTCAGCGGGGTGTCCCTGATCCTCGGGCCGATGATCGGCGGCGTGCTGGTCGATCATTTCGGCTGGCCCAGCATATTCCTCGTCAACCTGCCTGTCGGCCTGCTGGCGCTCGGCCTCGGCCTTGCCGGGATCGACGAAAGCGCCGACCCCGATCATGCGGCGCTGGACCCGGCCGGGCAGATACTCTCCATCGCCCTCCTCGGCAGCCTCACCTATGGGCTGATCGGCGCCGGCCGGAACGGATGGGCGGCGGCGGACGTGCTGGCGGCCTTCGGGATCGCGCTTGCGAGCGCTATCCTGTTCATCGCCGTCGAGCGCCGTGTCGAGCGGCCGGTGCTGCCGGTCGACCTCTTCCGCGACAGCGGCTTCGCGCTCGTCAACCTCGCCTCCTTCGTGCTCGGCTTCTGCGGCTATTCGAGCCTGTTCCTGTTCTCGCTCTTCCTGCAGCAGGCCCAGGGGTGGTCCGCTTCCGAGGCCGGCGGACGCATGGCGCCGGTCTTCGCCGCCATGGCGATCGTCGCCGCGCAGTTCGGTCGCCTGGCGAAGCGGTACGGGCAGACGCGCCTCATGGTCGCCGGCTACCTCCTGCTCGGCATCTCCATGCTGGCGATGACGGGCTTTTCCCCGGACACGGCCTATTGGATGATCGCTCCCGCCTTCACCCTTCTCGGGATCGGCATGGGGCTCGCCGTGCCTGCAACCGGCGCGGCGGCGATGCAGGCGGCGCCGCGGCAGCGGACAGGTGCGGCCTCGGCGACGATGAACGCGCTGCGCCAGAGCGGCATGACGATCGGCATCGCGCTGCTGGGTGCGGTCATGGTGGCCGGGGCTTCGGGCGACATGGCCCTGCGCCTTGCCGCCTCCGGCATGGACGACGCGCTCGCCCTCGCGGACAGCGCCGTCCGCAGCCACGCCCTGCCCGAAGGTCTTGTCATGGATCCCGCAGCCTTCAAGGCGCTGCTCGAGGCCGGCTTCGCGCACGGTTTCGCCCTCGCGGCCGGCATCGCGGGCCTCTGCGGCGTGGCCATGGCGCTGGCACTGGCCATAATGCCGCGCACCGGGACTGCCGGCCCGGCCGCTGCCGCGCCCGACGAAAACTGA
PROTEIN sequence
Length: 420
VASALATSLAVLIVGCAVQGIAGALVIPGALSILTQAFPDPAARSHVIGGWSSFSGVSLILGPMIGGVLVDHFGWPSIFLVNLPVGLLALGLGLAGIDESADPDHAALDPAGQILSIALLGSLTYGLIGAGRNGWAAADVLAAFGIALASAILFIAVERRVERPVLPVDLFRDSGFALVNLASFVLGFCGYSSLFLFSLFLQQAQGWSASEAGGRMAPVFAAMAIVAAQFGRLAKRYGQTRLMVAGYLLLGISMLAMTGFSPDTAYWMIAPAFTLLGIGMGLAVPATGAAAMQAAPRQRTGAASATMNALRQSGMTIGIALLGAVMVAGASGDMALRLAASGMDDALALADSAVRSHALPEGLVMDPAAFKALLEAGFAHGFALAAGIAGLCGVAMALALAIMPRTGTAGPAAAAPDEN*