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SCNpilot_expt_1000_bf_scaffold_5073_curated_2

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(1383..3035)

Top 3 Functional Annotations

Value Algorithm Source
Nitrate/nitrite transporter {ECO:0000313|EMBL:EYR82125.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.5
  • Coverage: 550.0
  • Bit_score: 1060
  • Evalue 0.0
Nitrate/nitrite transporter n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D392_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 93.5
  • Coverage: 550.0
  • Bit_score: 1060
  • Evalue 0.0
  • rbh
MFS permease similarity KEGG
DB: KEGG
  • Identity: 87.2
  • Coverage: 538.0
  • Bit_score: 986
  • Evalue 4.10e-285
  • rbh

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1653
ATGACCGTATCGACCGAGACCTATGCCGGCGGCTATTCCGGCAGCATCCTCGACCGGGAGCGCATCATCGCCAAGCCCGGCTTCAACCGCTGGCTCGTTCCGCCGGCCGCGCTCGCCATCCATCTGTGCATCGGCATGGCCTATGGCTTCAGCGTGTTCTGGCTGCCGCTCTCCAAGGCCATTTCCGGCGCTGCCGATCCGGCCTGCGCCGATCTCAACCTCGTGTCCGCGCTCTTCACCACGAGCTGCAACTGGCGCGTCGCCGATCTCGGCTGGATCTACACGCTGTTCTTCGTGCTGCTCGGCTGTTCGGCGGCCATCTGGGGCGGCTGGCTGGAGCGCGTCGGCCCGCGCAAGGCCGGCTTCGTCTCTGCCTGCTGCTGGTGCGGCGGTATCGTCGTGGCGGCGATCGGCGTCATGACGCACCAGTTGTGGCTGATGTGGCTCGGCGCGGGCGTCATCGGCGGCATCGGCCTTGGCCTCGGCTATATCTCGCCGGTCTCCACGCTGATCAAGTGGTTCCCGGACCGGCGCGGCATGGCGACCGGCATGGCGATCATGGGCTTCGGCGGCGGCGCGATGATCGGTGCCCCGCTCGCCAACCTCTTGATGAACGTCTTCAAGACCGACACGTCGGTCGGCGTCTGGCAGACCTTCCTCGTGATGGCGGCGATCTATTTCTGCTTCATGATGGGTGGCGCCTTCGGCTACCGCATCCCGCCCGCCGGCTGGCGGCCGGAGGGCTGGACGCCGCCGGTCTCCAAGTCGACGATGATCACCAACCGGCATGTGCATCTGCGCGACGCGCACAAGACGGCGCAGTTCTGGCTGATCTGGCTGGTGCTCTGCCTCAACGTATCGGCCGGCATCGGCGTGATCGGCATGGCCTCGCCCATGCTGCAGGAAATCTTCGGCGGACGCCTCATCGGTCAGCCGGACCTTACCTTCAGCCAGCTCGACACCGAGCAGAAGGCGGCGATCGCGGCCATTGCGGCAGGCTTCACCGGCCTCATCTCGCTGTTCAACATCGGCGGACGCTTCTTCTGGGCCTCGCTCTCCGACAAGATCGGCCGCAAGAACACCTATTACACGTTCTTCATCCTCGGCATCGTGCTCTACATGGCCGCGCCGACGCTCGCCGACATGGGCAGCAAGGCGCTCTTCGTCTTGTCCTTCGGCATCATCCTGTCCATGTATGGCGGCGGCTTCGCCACCGTCCCGGCCTATCTTGCGGACATCTTCGGCACGCAGTTCGTGGGGGCGATCCACGGGCGCCTGCTGACTGCCTGGGCGACCGCCGGCATCGTCGGGCCGGTCGTGGTCAACTATATCCGGGAGGCGCAGATCGCCGCCGGCGTGGCGCCGGGACCGGAGCTCTACAGCGGCACGATGTACATCCTCGCCGGCATGCTGGCGCTCGGCCTCGTCGCCAATGTGCTGGTGCGGCCGCTTTCGGAGAAGTGGTTCATGTCGGACGAGGAGGTCGCCTCCCTGCAGGCGAAGACCGCGGCGGCCAATGCCGGCCCCACCGGCTCGTTCGGCATCGGCAAGGGCAGCCTCGACGGCAAGGCGGTCCTCGCCTGGGCTGTCGTAGGCCTGCCGCTGCTCTGGGGCATCTGGGTGACGCTGAAGAGCACGGCTGCACTGTTCTAG
PROTEIN sequence
Length: 551
MTVSTETYAGGYSGSILDRERIIAKPGFNRWLVPPAALAIHLCIGMAYGFSVFWLPLSKAISGAADPACADLNLVSALFTTSCNWRVADLGWIYTLFFVLLGCSAAIWGGWLERVGPRKAGFVSACCWCGGIVVAAIGVMTHQLWLMWLGAGVIGGIGLGLGYISPVSTLIKWFPDRRGMATGMAIMGFGGGAMIGAPLANLLMNVFKTDTSVGVWQTFLVMAAIYFCFMMGGAFGYRIPPAGWRPEGWTPPVSKSTMITNRHVHLRDAHKTAQFWLIWLVLCLNVSAGIGVIGMASPMLQEIFGGRLIGQPDLTFSQLDTEQKAAIAAIAAGFTGLISLFNIGGRFFWASLSDKIGRKNTYYTFFILGIVLYMAAPTLADMGSKALFVLSFGIILSMYGGGFATVPAYLADIFGTQFVGAIHGRLLTAWATAGIVGPVVVNYIREAQIAAGVAPGPELYSGTMYILAGMLALGLVANVLVRPLSEKWFMSDEEVASLQAKTAAANAGPTGSFGIGKGSLDGKAVLAWAVVGLPLLWGIWVTLKSTAALF*