ggKbase home page

SCNpilot_expt_1000_bf_scaffold_5077_curated_2

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(1384..3309)

Top 3 Functional Annotations

Value Algorithm Source
5-dehydro-2-deoxygluconokinase IolC n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CES3_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 92.2
  • Coverage: 644.0
  • Bit_score: 1205
  • Evalue 0.0
  • rbh
5-dehydro-2-deoxygluconokinase IolC {ECO:0000313|EMBL:EYR84224.1}; EC=2.7.1.92 {ECO:0000313|EMBL:EYR84224.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.2
  • Coverage: 644.0
  • Bit_score: 1205
  • Evalue 0.0
sugar kinase IolC-like protein similarity KEGG
DB: KEGG
  • Identity: 83.1
  • Coverage: 639.0
  • Bit_score: 1078
  • Evalue 0.0
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1926
ATGCCCCATACGGACCAGACGAAGACGCTCGACATCATCACGATCGGCCGCTCGTCCGTCGATCTTTATGGCCAGCAGCTCGGCACGCGCCTGGAAGACACGGCCTCCTTCGCGAAATCGGTCGGCGGCTGCCCCGCCAATATCGCCATCGGCACCGCCCGCCTCGGCCTCAAGTCCGCACTCATCACCCGCGTCGGCGACGAGCAGATGGGCCGCTTCATCCGCGAGCAATCCGCCCGCGAAGGCGTCAATGTCGAGGGCATCAGGACCGACAAGGAGCGGCTGACGGCGCTGGTGCTGCTCGCCATCGAATCCGAGGGCGTTTCGCCGATGATCTTCGTGCGCACCGACTGCGCCGACATGGCGCTCGACGAGGGCGACGTGGACGAGGCCTTCGTGCGCTCCTCGCGCGCCGTGCTGGTTTCCGGCACGCACTTCTCCCGCCCCAACACCGAGGCCGCGCAGCGCAAGGCGATCCGCATCGCCGAAGAGAGCGGCGGCAAGGTCGTCTTCGACATCGACTATCGTCCGAACCTCTGGGGCCTTGCCGGCCATGCCGAGGGCTTCGAGCGCTATGTGAAGTCCGACCGCGTCTCGGCCATCATGAAATCCGTGCTGCCGGATTGCGACCTGATCGTCGGCACGGAAGAAGAGATCATGATCGCCTCGGGCGCGGACGACGTGCTCTCCTCGCTGAAGGCGATCCGCGCGGTCTCGTCCGCGACCATCGTGCTGAAGCGCGGCGCCATGGGCTGCATCGTCTATGACGGCCCGATCTCCGACGATCTGGAAGACGGCGTGATCGGCCAGGGCTTTCCCATCGAGGTCTATAACGTGCTCGGCGCGGGCGATGCCTTCATGTCGGGCTTCCTGCGTGGCTGGCTCAAGGGCGAGGACCATGCGACCTCCGCGACCTGGGCCAATGCCTGCGGCGCCTTCGCCGTCTCGCGCCTGCTCTGCTCGCCGGAATATCCGAGCTGGGAGGAGTTGGAGTTCTTCCTGAAGAACGGCAGCAAGCACCGGGCGCTGCGCAAGGACGAGGCGATCAACCACATCCACTGGGCGACGAACCGCAAGCAGGGCGACATTCCGCTCCTCATGGCGCTCGCCTGCGACCACCGCATGCAGCTCGTCGACGTCGCCGACGAACTCGGCGTGCCGCACGAAAAGATCTCCGAATTCAAGCGCCTCACCGTCGAAGCCGCCGCGCGGGTGGCCGAAGGGCGGCCGGGCTATGGCATGCTGATCGACGAGCGCTTCGGGCGCGACGCCTTCTTCGACGCCGCCACCAAGGATTTCTCCTGGCTCGGCCGGCCGGTCGAGCTGCCGGGCTCCAAGCCGCTGCGCTTCGAATTCAGCCAGGATATCGGCTCGCAGCTCGTGGAATGGCCGCTCGACCATTGCATCAAGTGCCTGTGCTTCTACCATCCCGACGATCCGGCCGCGCTCAAGCAGGAGCAGCAGGAGAAGCTGCGCACCCTTTTCGAGGCGGCGCGCCGCGTCGGGCGCGAGCTGCTGGTCGAGATCATCGCCGGCAAGAACGGGCCGCTCAGGGACGATACGATCTCCACGGCGTTGCAGGAGCTCTACGATCTCGGCATCAAGCCGGACTGGTGGAAGCTGGAGCCGCAGGCCTCCCCGGAGACATGGCGGAACATCGAGGCGGTGATCGCCCGGAACGACGCCTGGTGCCGTGGCATCGTGCTGCTCGGGCTGGAGGCGCCGACGGAGGACCTGATCAAGGCCTTCGAGGCGACGAAGGTGGCGCCGGCCGTCAAGGGCTTTGCCGTCGGCCGCACGATCTTCGCCGATGCGGCCCGCGCCTGGATGGCCGGCAGGATGGACGACGAGGCGGCCATCGCCGACATGGCCGGCCGCTTCCGTGCGCTGACCGATGCGTGGCTCGGGACGCGCGGATTGAAATAG
PROTEIN sequence
Length: 642
MPHTDQTKTLDIITIGRSSVDLYGQQLGTRLEDTASFAKSVGGCPANIAIGTARLGLKSALITRVGDEQMGRFIREQSAREGVNVEGIRTDKERLTALVLLAIESEGVSPMIFVRTDCADMALDEGDVDEAFVRSSRAVLVSGTHFSRPNTEAAQRKAIRIAEESGGKVVFDIDYRPNLWGLAGHAEGFERYVKSDRVSAIMKSVLPDCDLIVGTEEEIMIASGADDVLSSLKAIRAVSSATIVLKRGAMGCIVYDGPISDDLEDGVIGQGFPIEVYNVLGAGDAFMSGFLRGWLKGEDHATSATWANACGAFAVSRLLCSPEYPSWEELEFFLKNGSKHRALRKDEAINHIHWATNRKQGDIPLLMALACDHRMQLVDVADELGVPHEKISEFKRLTVEAAARVAEGRPGYGMLIDERFGRDAFFDAATKDFSWLGRPVELPGSKPLRFEFSQDIGSQLVEWPLDHCIKCLCFYHPDDPAALKQEQQEKLRTLFEAARRVGRELLVEIIAGKNGPLRDDTISTALQELYDLGIKPDWWKLEPQASPETWRNIEAVIARNDAWCRGIVLLGLEAPTEDLIKAFEATKVAPAVKGFAVGRTIFADAARAWMAGRMDDEAAIADMAGRFRALTDAWLGTRGLK*