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SCNpilot_expt_1000_bf_scaffold_4153_curated_22

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: 15555..16463

Top 3 Functional Annotations

Value Algorithm Source
Diheme cytochrome c-type n=1 Tax=Shinella zoogloeoides DD12 RepID=V5C741_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 88.7
  • Coverage: 302.0
  • Bit_score: 566
  • Evalue 1.80e-158
  • rbh
Diheme cytochrome c-type {ECO:0000313|EMBL:EYR80780.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.7
  • Coverage: 302.0
  • Bit_score: 566
  • Evalue 2.50e-158
diheme Cytochrome-c-type signal peptide protein similarity KEGG
DB: KEGG
  • Identity: 71.6
  • Coverage: 296.0
  • Bit_score: 458
  • Evalue 1.60e-126
  • rbh

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 909
ATGGCATTCGGAAGATTTCTTGGCGGCATCGTCGTGATAGGCGCGCTCGGCGCCGGCGCGTTCCTTTTCCTGACGGCGCCGGAACGGTTGCCGGCCGAGACCTGGGCCACGGCAGGCGAGCCGGACCTTGCCAATGGCGAGCGCCTCTTCCATGCGGGCGGTTGCGCGAGCTGTCACGCCGCGCCGGGCGCGCCCGACGACCAGAAGCGCGTGCTGGCCGGGGGCCTTGCGCTGAAGAGCCCGTTCGGCACCTTCCACGCGCCGAACATCTCGCCCGACGAGACGGCGGGCATCGGCGCCTGGACGCTGGCCGAATTCGGCGATGCCATGAAGCGCGGCACCGGCCGCAACGGCGAGCATCTCTATCCTTCCTTTCCCTACGCCTCCTACGCGCGCATGAAGGTGACGGACGTCCGCGACCTCTACGGCTACCTGAAGACCCTGCCGAAGAGCGGCAATGTCGCGCCGGAGCACGAGCTGCCGTTCCCCTTCAATATCCGCCTGGCGCTCGGCGGCTGGAAGTTCCTCTACCTCGACGAAGCGCCGCGCGTGGACCTCGCCAATGCCGACGAGACCGTGAAGCACGGCCAGTACCTCGTGGAAGGGCCGGGCCATTGCGGCGAATGCCACACGCCGCGCGACATGCTGGGCGGGCTGAAGACGGACCAGTGGCTTGCCGGCGGGCCGAACCCGGAAGGCGAGGGCCGCATCCCCGACATCACCCCCGTCGAGGGCCGCTTCGGCAGCTGGAGCGCGGGCGACATCGTCAACTACCTCGAAACCGGCTTCACCCCGGAATTCGACAGCGTCGGCGGCGCGATGGTCTCAGTGCAGAAGAACATGGCGCAACTGCCGAAGGAAGACCGCGAGGCAATCGCCGCCTACCTGAAGGCGATCCCGGCGCGGTGA
PROTEIN sequence
Length: 303
MAFGRFLGGIVVIGALGAGAFLFLTAPERLPAETWATAGEPDLANGERLFHAGGCASCHAAPGAPDDQKRVLAGGLALKSPFGTFHAPNISPDETAGIGAWTLAEFGDAMKRGTGRNGEHLYPSFPYASYARMKVTDVRDLYGYLKTLPKSGNVAPEHELPFPFNIRLALGGWKFLYLDEAPRVDLANADETVKHGQYLVEGPGHCGECHTPRDMLGGLKTDQWLAGGPNPEGEGRIPDITPVEGRFGSWSAGDIVNYLETGFTPEFDSVGGAMVSVQKNMAQLPKEDREAIAAYLKAIPAR*