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SCNpilot_expt_1000_bf_scaffold_4659_curated_21

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(21895..22743)

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein {ECO:0000313|EMBL:KKB62027.1}; TaxID=28092 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia andropogonis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 58.4
  • Coverage: 262.0
  • Bit_score: 322
  • Evalue 4.40e-85
binding-protein-dependent transporters inner membrane component; K11070 spermidine/putrescine transport system permease protein similarity KEGG
DB: KEGG
  • Identity: 32.8
  • Coverage: 247.0
  • Bit_score: 139
  • Evalue 1.20e-30
Binding-protein-dependent transport system inner membrane protein n=1 Tax=Natrialba magadii (strain ATCC 43099 / DSM 3394 / NCIMB 2190 / MS3) RepID=D3SVW4_NATMM similarity UNIREF
DB: UNIREF100
  • Identity: 32.8
  • Coverage: 247.0
  • Bit_score: 139
  • Evalue 3.80e-30

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Taxonomy

Burkholderia andropogonis → Burkholderia → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 849
ATGACAAGCCAACAACCCCTGAAGCTGCGCCCGATCTCCTCGAAGCTCGAGCCCAGCTATGCGCCGATCTGGAAGCGCCTCGGCAAATGGAGCGGGTTCGCCATGCTGGCGCTCATCTATTTCCCGCTGCTGTGGCTGATCCTGCTGTCGATCAGCCAGAACCCGCTCGGCGGCATCCCCGGCGCGTTCTCGCTGGAGCATTATCGCGCGCTCTTTTCCAGCAGCGCCTGGCACAAGCCCATGCTGGCAAGCCCCGGCATCGGCGTTGCCGTCGGGCTGATCTGCGCCATCGCCGCGACGATCATCGGCCGGGCCCTGCCGACGCTGAACAGCCCCGGCCGGGTGCTCTTCATGTTCGTCATCCCGCTCTTCGTGCCTGGCATGTCGATGGGGGCGGCCCTGTTCATCTTCGCAAGGGCCGTCCTCAACCTGAAGCTCGGCTTCTGGTCGGTCGCGCTCGGCCATTTCGTCTGGGCGTTTCCCTTCGCGCTGCTGATCGTGCTGGTGGTGACGATCCGCTTCGACCATCGGCTGGTCGAGGCCGGCAAGGACCTCGGCGCCAGCAACTGGCGCGTCTTCTGGGACATCGAGTTCCCCATCCTGATGCCCGGCATCGTCAGCGCGGCGCTGTTCGGCTTCCTGATGTCGTTCAACGAGGTCATGCGGTCGATCTTCCTGCGCGGAACCGCCGAGACCATGCCGGTCTGGAGCTGGGTCCAGGCGGCGGCCCAGCAGAGCCAGGTGCCGATCATCTTCTCGCTGGCCTCGCTGGTGCTCCTCATCACCCTGCCGCTGCTGTGCGGCGTGTTCTGGCTGCTCTTTGCGCGGGTGGGCCGGTCATGGGCATGA
PROTEIN sequence
Length: 283
MTSQQPLKLRPISSKLEPSYAPIWKRLGKWSGFAMLALIYFPLLWLILLSISQNPLGGIPGAFSLEHYRALFSSSAWHKPMLASPGIGVAVGLICAIAATIIGRALPTLNSPGRVLFMFVIPLFVPGMSMGAALFIFARAVLNLKLGFWSVALGHFVWAFPFALLIVLVVTIRFDHRLVEAGKDLGASNWRVFWDIEFPILMPGIVSAALFGFLMSFNEVMRSIFLRGTAETMPVWSWVQAAAQQSQVPIIFSLASLVLLITLPLLCGVFWLLFARVGRSWA*