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SCNpilot_expt_1000_bf_scaffold_5013_curated_1

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: 3..431

Top 3 Functional Annotations

Value Algorithm Source
DNA polymerase {ECO:0000256|RuleBase:RU004460}; EC=2.7.7.7 {ECO:0000256|RuleBase:RU004460};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.0
  • Coverage: 142.0
  • Bit_score: 270
  • Evalue 1.70e-69
DNA polymerase I; K02335 DNA polymerase I [EC:2.7.7.7] similarity KEGG
DB: KEGG
  • Identity: 85.2
  • Coverage: 142.0
  • Bit_score: 252
  • Evalue 8.30e-65
DNA polymerase I n=1 Tax=Rhizobium meliloti RepID=UPI0002F362D0 similarity UNIREF
DB: UNIREF100
  • Identity: 85.2
  • Coverage: 142.0
  • Bit_score: 252
  • Evalue 2.60e-64

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 429
TATTTCGAGCGCTTCCCGGGCATCAAGGACTACATGGACTCGACCAAGGCCTTTGCCCGCGAGAACGGCTATGTCGAGACGATCTTCGGCCGCCGCGCCCATTACCCGGAGATCAAGTCGTCCAACCCCTCGGTGCGCGCCTTCAACGAGCGCGCCGCGATCAACGCGCCGATCCAGGGCTCGGCCGCCGACATCATCCGCCGCGCCATGGTGAAGATGGAGCCGGCGCTCGCCGCCGCCGGCCTGTCCGCCCGCATGCTGCTGCAGGTGCATGACGAACTGATCTTCGAGGTCGAGGAGGGCGAGGTCGACAAGGCCATCCCCGTCATCGTCGACATCATGGAAAACGCCTCCATGCCGGCGCTCTCGATGAAGGTGCCGCTGAAGGTCGACGCGCGGGCGGCGACCAACTGGGACGAGGCGCACTGA
PROTEIN sequence
Length: 143
YFERFPGIKDYMDSTKAFARENGYVETIFGRRAHYPEIKSSNPSVRAFNERAAINAPIQGSAADIIRRAMVKMEPALAAAGLSARMLLQVHDELIFEVEEGEVDKAIPVIVDIMENASMPALSMKVPLKVDARAATNWDEAH*