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SCNpilot_expt_1000_bf_scaffold_1697_curated_3

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: 1994..2452

Top 3 Functional Annotations

Value Algorithm Source
Cytochrome c-type biogenesis protein CcmH n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CY60_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 92.1
  • Coverage: 152.0
  • Bit_score: 276
  • Evalue 1.40e-71
Cytochrome c-type biogenesis protein CcmH {ECO:0000313|EMBL:EYR81183.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.1
  • Coverage: 152.0
  • Bit_score: 276
  • Evalue 2.00e-71
ccmH; cytochrome c-type biogenesis protein; K02200 cytochrome c-type biogenesis protein CcmH similarity KEGG
DB: KEGG
  • Identity: 72.2
  • Coverage: 151.0
  • Bit_score: 221
  • Evalue 1.70e-55

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 459
ATGATGCGCCGCCTGCTTCTCGCCGTCGCCTTCCTCCTGGCCGCCGTCCCGGCCTTCGCCGTCAACCCGGACGAAGTGCTCTCCGACCCGGCCCTGGAGGCGCGCGCACGCGCGCTTTCGGCGCAGTTGCGCTGCATGGTCTGCCAGAATCAGTCGATCGACGATTCCAATGCCGAGCTTGCCCGCGACCTGCGCCTGCTCGTGCGCGAGCGGCTGAAGAACGGCGACAGCGACGAAGCGGTGATCGACTACGTGGTATCCCGCTACGGCGAATTCGTGCTGCTGAACCCGCGCGTGCGCGGCGAGACGCTGCTTCTGTGGGGTGCGCCGCTGGTGCTTTTCCTCGCCGGCGCGGCGGCGATGATCCTGTTCGTGCGCAAGCGCGGCGGCAGGCCGACGGGCACCCCGCTTTCCGAGGCGGAGAAGGCGGAACTGGAGCGCGCCCTGAAGCGCGACTAG
PROTEIN sequence
Length: 153
MMRRLLLAVAFLLAAVPAFAVNPDEVLSDPALEARARALSAQLRCMVCQNQSIDDSNAELARDLRLLVRERLKNGDSDEAVIDYVVSRYGEFVLLNPRVRGETLLLWGAPLVLFLAGAAAMILFVRKRGGRPTGTPLSEAEKAELERALKRD*