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SCNpilot_expt_1000_bf_scaffold_4376_curated_5

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(4417..5529)

Top 3 Functional Annotations

Value Algorithm Source
Polyamine-transporting ATPase {ECO:0000256|SAAS:SAAS00083160}; EC=3.6.3.31 {ECO:0000256|SAAS:SAAS00083160};; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilata.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 53.4
  • Coverage: 365.0
  • Bit_score: 355
  • Evalue 1.10e-94
Spermidine/putrescine import ATP-binding protein PotA n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EUP9_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 53.4
  • Coverage: 369.0
  • Bit_score: 349
  • Evalue 4.10e-93
  • rbh
potA9; Spermidine/putrescine import ATP-binding protein PotA (EC:3.6.3.31) similarity KEGG
DB: KEGG
  • Identity: 53.7
  • Coverage: 369.0
  • Bit_score: 346
  • Evalue 8.40e-93
  • rbh

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Taxonomy

Microvirga aerilata → Microvirga → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1113
ATGAGTTTCATAACATTCCAGTCCATTCGAAAGGCCTATGGAAGCGGAGCCAATCCGATTGTCGCCGTGGAGAGGCTCGACCTGACCATCGAACAGGGCGAGTTCATGACGTTTCTCGGCCCCTCCGGCTCGGGCAAGACGACGACGCTGATGATGCTGGCAGGGTTCGAGCAGCCGACTTCCGGGGCGATCCTGCTCGAGAAAACCCATATCGAGAAACTGCCGGCCTATGCCCGCAACATGGGCGTGGTGTTCCAGAGCTATTCCCTCTTTCCCCACATGACGGTGGCGCAGAACGTCGCCTTTCCGCTGGAAATGCGCAAGGTTCCGGGCACGCAGATCAGGGAGCGGGTTTCGGCGGCCCTGGCAAAGGTGAAGCTCGCCGGACATGCCGACCGTCGGCCCGCGCAGCTTTCCGGCGGCGAACAGCAGCGTGTCGCTCTCGCAAGGGCCCTTGTTTTCGAGCCGCGCCTTGTGCTCATGGACGAGCCGCTTTCGGCGCTGGACAAGAACCTGCGCGAGGAACTGCAGTTGGAGATTCGACGGCTGCACCGGGAACTCGGCGTGACCATGGTGTTCGTGACGCACGACCAGTCCGAGGCGATGACCCTGTCGGATCGCGTGACCGTCTTCAACCGCGGCCGGATCGCGCAGCTCGGCAAGCCCGCGGCGCTTTACGATGCCCCCGAGAATGTCTTCGTCGCGGGCTTCATCGGCGACAACAATCGCGCCGGAGGGCTCGTCGCGGAAATCGCTGCCGATGGGCATTCGGCGAGCCTGCGTTCAGGCAGCGCAGTGCTGCGGGGCAAGGCGCATCCCGGAAAATTGACGGCGGGCGGCGCGGGAATCCTCTGCGTGCGGCCGGAAGCTCTGGTGCTGCTCGTGCGGAATGCGGCGACCGGGTGTGACAATAACGTGCCGGCGACGGTCACGGACATGATTCATCAGGGCGACCATTGGCGCATCCAACTCCAGGCCACGGCGGTGGCCGCAGACGGAGGTTGGACGGCGAAGTGCCGGCCCGAGCAAATTCCCGACGGGCTGCAAATCGGCGGCCCCGTAACGATCGGATTTAACTCGAGGGATGCTTGGGTTCTCGATCTGGGTGAATGA
PROTEIN sequence
Length: 371
MSFITFQSIRKAYGSGANPIVAVERLDLTIEQGEFMTFLGPSGSGKTTTLMMLAGFEQPTSGAILLEKTHIEKLPAYARNMGVVFQSYSLFPHMTVAQNVAFPLEMRKVPGTQIRERVSAALAKVKLAGHADRRPAQLSGGEQQRVALARALVFEPRLVLMDEPLSALDKNLREELQLEIRRLHRELGVTMVFVTHDQSEAMTLSDRVTVFNRGRIAQLGKPAALYDAPENVFVAGFIGDNNRAGGLVAEIAADGHSASLRSGSAVLRGKAHPGKLTAGGAGILCVRPEALVLLVRNAATGCDNNVPATVTDMIHQGDHWRIQLQATAVAADGGWTAKCRPEQIPDGLQIGGPVTIGFNSRDAWVLDLGE*