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SCNpilot_expt_1000_bf_scaffold_17105_curated_1

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(3..749)

Top 3 Functional Annotations

Value Algorithm Source
Acetyltransferase component of pyruvate dehydrogenase complex {ECO:0000256|RuleBase:RU361137}; EC=2.3.1.12 {ECO:0000256|RuleBase:RU361137};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.1
  • Coverage: 252.0
  • Bit_score: 381
  • Evalue 1.20e-102
branched-chain alpha-keto acid dehydrogenase subunit E2 n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI00036744CE similarity UNIREF
DB: UNIREF100
  • Identity: 79.6
  • Coverage: 250.0
  • Bit_score: 363
  • Evalue 2.40e-97
dihydrolipoyllysine-residue acetyltransferase component of pyruvatedehydrogenase complex (EC:2.3.1.12); K00627 pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase) [EC:2.3.1.12] similarity KEGG
DB: KEGG
  • Identity: 79.4
  • Coverage: 252.0
  • Bit_score: 361
  • Evalue 2.90e-97

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 747
ATGCCGATCAACATTACGATGCCCGCCCTTTCGCCCACCATGGAAGAGGGCAATCTCGCCAAGTGGCTCGTCAAGGAAGGCGACACCGTGAAATCCGGTGACGTCATCGCCGAGATCGAGACCGACAAGGCGACGATGGAAGTCGAGGCCGTCGACGAAGGCGTTGTCGCCAAGATCGTCGTGCCGGCCGGCACGGAAGGCGTGAAGGTCAACAGCCTCATCGCCATCCTCGCCGCCGACGGCGAGGACGTGGCGGCCGCGGCCAGCGGCGGCGGTTCCGCCCCGAAGGCAGAGGCTCCGAAGGCGGAGGCTAAGGCGCCCGAGGCCAAGGCCGAAGCGCCGAAGGAAGCGGAAAAGCCGGCCGCCGCCGCGGCATCGGCTCCTGCTGCGACGGCCTCGGCAGGACCCGCTCCGGCGAAGGACGGCAGCCGCGTCTTTTCCTCGCCGCTCGCCCGGCGTCTTGCCAAGGAGGCCGGCATCGACATTTCGGCGGTTTCGGGCTCCGGGCCGCACGGCCGCATCGTGAAGGGTGACATCGAGAAGGCCATCGCTTCCGGCGGCGCAAAGCCCGCCGCCGCAGCCGCTCCGGCTGCTGCTGCAGCGCCCGCCGCCGCGCCGAAGGGCATGTCGGAAGACGCCGTGCTCAAGCTCTTCGACGAAGGCTCCTACGAGCTCGTGCCGCATGACGGCATGCGCAAGACCATCGCCAAGCGCCTGCAGGAATCCAAGCAGACGATCCCGCACTTC
PROTEIN sequence
Length: 249
MPINITMPALSPTMEEGNLAKWLVKEGDTVKSGDVIAEIETDKATMEVEAVDEGVVAKIVVPAGTEGVKVNSLIAILAADGEDVAAAASGGGSAPKAEAPKAEAKAPEAKAEAPKEAEKPAAAAASAPAATASAGPAPAKDGSRVFSSPLARRLAKEAGIDISAVSGSGPHGRIVKGDIEKAIASGGAKPAAAAAPAAAAAPAAAPKGMSEDAVLKLFDEGSYELVPHDGMRKTIAKRLQESKQTIPHF