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SCNpilot_expt_1000_bf_scaffold_15370_curated_6

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: 5364..6626

Top 3 Functional Annotations

Value Algorithm Source
Putative ribose/galactose/methyl galactoside import ATP-binding protein 3 n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D4J7_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 91.9
  • Coverage: 420.0
  • Bit_score: 748
  • Evalue 2.70e-213
Monosaccharide-transporting ATPase {ECO:0000256|SAAS:SAAS00041637}; EC=3.6.3.17 {ECO:0000256|SAAS:SAAS00041637};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.9
  • Coverage: 420.0
  • Bit_score: 748
  • Evalue 3.70e-213
rbsA; ribose ABC transporter ATPase; K02056 simple sugar transport system ATP-binding protein [EC:3.6.3.17] similarity KEGG
DB: KEGG
  • Identity: 79.0
  • Coverage: 415.0
  • Bit_score: 634
  • Evalue 3.00e-179

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1263
ATGGTGCACCAGGAGCTGAACCTCGTTCCCGACCTCACGGTCGCCGAAAACATCTTCCTCGGCCGCATGCCGAGGCGCCTCGGCTTCTTCGACCGCGGCGGCATGGTGCGCCGCGCCGCCGCCATCCTCGCCGAGCTCGGCGCCGCCATCGATCCGCAGCAGCGCCTGGGCGACCTGTCGATCAGCCAGCAGCAGCTCGTGGAGATCGCGAAAGCCTATGCCGCCGAGCCGCGCATCATCGTGCTCGACGAGCCGACTTCCAGCCTCAGCGAGCACGAGACCGCCGCGCTCTTCCGCATCCTGCGCAAGATGCGCGATGCCGGCATCGCCATCATCTATATCAGTCACCGCCTCAAGGAGGTGCTTGATATCGCCGACGAGGTGACGGTGCTGCGCGACGGCGCGATGATCGAGACCCGGCCCGCCAGCGGCATCACCGCAGCTGAAATGATCCGCCTCATGGTCGGCCGCGAGGTGAGCAACGTCTTCCCGAAGACCCCGTCGACCATCGGCAGGCAGGTGCTGCGGGTGCGCAATGCCGGGGACGGCGAGCGCTTCCACGCCATCAGCTTCGACGTGCGCGCCGGCGAGATTCTCGGCCTCACCGGCCTCGTCGGCGCCGGCCGCACGGAGGTCGCCCGCGCCATCTTCGGCCTTGCGCCGCTGACATCGGGCACGGTCGAGATCGACGGCGCACCGGTGACGATCGGCTCGCCCGCGGCGGCCGCCCGCGCCGGCATCGCCTATGTGCCGGAGGACCGCAAGGGCGACGGCATCATGCCCGCCATGACGGTGCGCGAGAATATCAGCCTGCCGGTGCTGCGCCGGCTCGCCAACCGTTTCGGCCGCGTGCGGCGCGGCGCCGAGCGTGAGCTTGCCGGCACCTATGTGCGCAAGTTCTCCATCGTGCCGCCGGATGGCGAGCGGCGCATCGGCCTGCTCTCCGGCGGCAACCAGCAGAAGGCGGTGATCAGCCGCTGGCTCGCCACCGATCCGAAGGTGCTGATCCTCGACGAGCCGACGCGCGGCGTCGACGTCGGCGCCAAGGCGGAGATTCACGGGATCATCGGCCAGCTCGTCGCCAACGGCATGGCCGTGGTGATGATCTCCTCCGAGCTACCGGAAATCATGGGCGTGTGCGACCGCGTGGTCGTCATGCGCGACGGGCGCGCCTCCGTGCCGCTTGCCCGCGAGGGCCTGACGGAGGAGCGCATCATGGCGCTCGCCACGGGCGAGGAAAGTGCAGAAGGGGAGGCCGCATGA
PROTEIN sequence
Length: 421
MVHQELNLVPDLTVAENIFLGRMPRRLGFFDRGGMVRRAAAILAELGAAIDPQQRLGDLSISQQQLVEIAKAYAAEPRIIVLDEPTSSLSEHETAALFRILRKMRDAGIAIIYISHRLKEVLDIADEVTVLRDGAMIETRPASGITAAEMIRLMVGREVSNVFPKTPSTIGRQVLRVRNAGDGERFHAISFDVRAGEILGLTGLVGAGRTEVARAIFGLAPLTSGTVEIDGAPVTIGSPAAAARAGIAYVPEDRKGDGIMPAMTVRENISLPVLRRLANRFGRVRRGAERELAGTYVRKFSIVPPDGERRIGLLSGGNQQKAVISRWLATDPKVLILDEPTRGVDVGAKAEIHGIIGQLVANGMAVVMISSELPEIMGVCDRVVVMRDGRASVPLAREGLTEERIMALATGEESAEGEAA*