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SCNpilot_expt_1000_bf_scaffold_4159_curated_8

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(5154..5930)

Top 3 Functional Annotations

Value Algorithm Source
Imidazole glycerol phosphate synthase subunit HisF n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CZ90_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 97.7
  • Coverage: 258.0
  • Bit_score: 500
  • Evalue 7.70e-139
  • rbh
Imidazole glycerol phosphate synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; EC=4.1.3.- {ECO:0000256|HAMAP-Rule:MF_01013};; IGP synthase cyclase subunit {ECO:0000256|HAMAP-Rule:MF_01013}; IGP synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; ImGP synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.7
  • Coverage: 258.0
  • Bit_score: 500
  • Evalue 1.10e-138
hisF; imidazole glycerol phosphate synthase subunit HisF; K02500 cyclase [EC:4.1.3.-] similarity KEGG
DB: KEGG
  • Identity: 87.6
  • Coverage: 258.0
  • Bit_score: 456
  • Evalue 6.90e-126
  • rbh

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 777
ATGACTTTGAAAGCGCGCGTCATTCCCTGCCTCGACGTCAAGGACGGCCGCGTCGTCAAGGGCGTCAGCTTCGTCAACCTGATCGATGCCGGCGATCCCGTGGAATCGGCCAAGGCCTATGATGCCGCCGGTGCCGACGAGCTCTGCTTCCTCGACATCACCGCCTCTTCCGACAACCGCGACACGATCTTCGACGTCGTGGCGCGCACGGCGGACCATTGCTTCATGCCGCTCACCGTCGGCGGGGGCGTGCGCACGGTCGCCGACATCCGCAAGCTGCTGCTCGCCGGGGCCGACAAGGTGTCGATCAACTCGGCCGCCGTCGCCAACCCGGATTTCGTCGCGGAAGCCGCCGACAAGTTCGGCAACCAGTGCATCGTCGTCTCGATCGATTCCAAGAAGGTTTCGGCGGAAGGCGAAGAGGACCGCTGGGAAATCTTCACCCATGGCGGGCGCAAGCCGACCGGCATCGACGCCGTCGCCTTCGCCGAGAAGATGGTGGAGCGCGGCGCGGGCGAGCTGCTGCTCACCTCCATGGACCGCGACGGCCAGAAGGGCGGCTACGACATCGCGCTGACCCGTACGATCGCCGACCGTGTCCCGGTACCGGTCATCGCGTCCGGCGGCGTCGGCACGCTCGACCATCTCGTCGAGGGCGTGCGCGACGGCCATGCGACGGCAGTGCTGGCCGCCTCGATCTTCCACTTCGGCACCTACACGGTGGGCGAGGCCAAGCGCTACATGGCCGACCATGGCATCGCCATGCGGCTCGACTGA
PROTEIN sequence
Length: 259
MTLKARVIPCLDVKDGRVVKGVSFVNLIDAGDPVESAKAYDAAGADELCFLDITASSDNRDTIFDVVARTADHCFMPLTVGGGVRTVADIRKLLLAGADKVSINSAAVANPDFVAEAADKFGNQCIVVSIDSKKVSAEGEEDRWEIFTHGGRKPTGIDAVAFAEKMVERGAGELLLTSMDRDGQKGGYDIALTRTIADRVPVPVIASGGVGTLDHLVEGVRDGHATAVLAASIFHFGTYTVGEAKRYMADHGIAMRLD*