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SCNpilot_expt_1000_bf_scaffold_3864_curated_23

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: 17513..17845

Top 3 Functional Annotations

Value Algorithm Source
Flagellar hook-basal body complex protein FliE n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CMB7_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 74.1
  • Coverage: 112.0
  • Bit_score: 159
  • Evalue 1.80e-36
Flagellar hook-basal body complex protein FliE {ECO:0000256|HAMAP-Rule:MF_00724, ECO:0000256|SAAS:SAAS00116622}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.1
  • Coverage: 112.0
  • Bit_score: 159
  • Evalue 2.50e-36
fliE; flagellar hook-basal body protein FliE; K02408 flagellar hook-basal body complex protein FliE similarity KEGG
DB: KEGG
  • Identity: 55.3
  • Coverage: 114.0
  • Bit_score: 113
  • Evalue 6.10e-23

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 333
ATGATCGACAGCATCAAGAGCATAAACGGCCTTCTTTCCGGCAGCGCCCTGACGGGCGTCGAGACGGGAAGCGCGAATTCCGTCTCCGCCGCGGCCGCGCAGGGAACGGGCTCCCAGGTGAGCTTCGCCCAGATCATGGGCGACATGGCAAGCGACATGGCCAACACGGTGAAACTCGGCGAGGCCAAGTCCTTCGAAGCCATCCAGGGCAAGGCATCGACCCGTGAAGTGGTCGATGCCGTCATGAACGCCGAGCAGACGCTGCAGACCGCCATCGCCATCCGCGACAAGGTCGTCACCGCCTATCTCGAAATAGCCAGAATGCAGATCTGA
PROTEIN sequence
Length: 111
MIDSIKSINGLLSGSALTGVETGSANSVSAAAAQGTGSQVSFAQIMGDMASDMANTVKLGEAKSFEAIQGKASTREVVDAVMNAEQTLQTAIAIRDKVVTAYLEIARMQI*