name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_1000_bf_scaffold_3864_curated_1
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
1..207
|
Chemotaxis protein CheW n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D4S6_9RHIZ
Chemotaxis protein CheW {ECO:0000313|EMBL:EYR82034.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
CheW protein; K03408 purine-binding chemotaxis protein CheW
|
|
SCNpilot_expt_1000_bf_scaffold_3864_curated_2
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
767..1105
|
Putative chemotaxis protein methyltransferase n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CVU6_9RHIZ
Chemotaxis protein methyltransferase {ECO:0000256|PIRNR:PIRNR000410}; EC=2.1.1.80 {ECO:0000256|PIRNR:PIRNR000410};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
cheR; chemotaxis protein methyltransferase CheR (EC:2.1.1.80)
|
|
SCNpilot_expt_1000_bf_scaffold_3864_curated_3
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
1102..2160
|
Chemotaxis response regulator protein-glutamate methylesterase {ECO:0000256|HAMAP-Rule:MF_00099}; EC=3.1.1.61 {ECO:0000256|HAMAP-Rule:MF_00099};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
cheB1; protein-glutamate methylesterase (EC:3.1.1.61); K03412 two-component system, chemotaxis family, response regulator CheB [EC:3.1.1.61]
rbh
Chemotaxis response regulator protein-glutamate methylesterase n=1 Tax=Agrobacterium sp. (strain H13-3) RepID=F0L5Z9_AGRSH
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_3864_curated_4
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
2160..2549
|
Putative chemotaxis protein CheY n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CDF4_9RHIZ
Putative chemotaxis protein CheY {ECO:0000313|EMBL:EYR82031.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
cheY2; chemotaxis regulator protein CheY-like; K03413 two-component system, chemotaxis family, response regulator CheY
|
|
SCNpilot_expt_1000_bf_scaffold_3864_curated_5
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
2546..3103
|
Probable chemoreceptor glutamine deamidase CheD n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CTB2_9RHIZ
rbh
Probable chemoreceptor glutamine deamidase CheD {ECO:0000256|HAMAP-Rule:MF_01440}; EC=3.5.1.44 {ECO:0000256|HAMAP-Rule:MF_01440};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
|
|
SCNpilot_expt_1000_bf_scaffold_3864_curated_6
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
3198..3587
|
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CKT4_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EYR82029.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_3864_curated_7
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
4060..5562
|
Flagellar M-ring protein FliF n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CQJ0_9RHIZ
rbh
Flagellar M-ring protein {ECO:0000256|PIRNR:PIRNR004862}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
fliF; Flagellar M-ring protein
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_3864_curated_8
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
6067..6876
|
DNA-binding HTH domain-containing protein {ECO:0000313|EMBL:EYR82027.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
luxR; transcriptional regulatory protein yhcZ
hypothetical protein n=1 Tax=Rhizobium giardinii RepID=UPI00037BD9EB
|
|
SCNpilot_expt_1000_bf_scaffold_3864_curated_9
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
6887..7630
|
Response regulator receiver protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CN44_9RHIZ
rbh
DNA-binding HTH domain-containing protein {ECO:0000313|EMBL:EYR82026.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
LuxR family transcriptional regulator
|
|
SCNpilot_expt_1000_bf_scaffold_3864_curated_10
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(7702..8145)
|
Uncharacterized protein {ECO:0000313|EMBL:EYR82025.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein n=1 Tax=Rhizobium giardinii RepID=UPI000367F402
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_3864_curated_11
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(8151..9230)
|
Flagellar biosynthetic protein FlhB {ECO:0000313|EMBL:EYR82024.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
flagellar biosynthesis protein FlhB n=1 Tax=Rhizobium giardinii RepID=UPI00037A542A
rbh
flhB; flagellar biosynthesis protein FlhB; K02401 flagellar biosynthetic protein FlhB
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_3864_curated_12
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(9364..10404)
|
Flagellar motor switch protein {ECO:0000313|EMBL:EYR82023.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
flagellar motor switch protein FliG n=1 Tax=Rhizobium giardinii RepID=UPI0003618E74
rbh
fliG; flagellar motor switch protein FliG; K02410 flagellar motor switch protein FliG
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_3864_curated_13
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(10436..10693)
|
Flagellar motor switch/type III secretory pathway protein {ECO:0000313|EMBL:EYR82022.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
flagellar motor switch protein FliN n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI00036701FC
flagellar motor switch protein FliN; K02417 flagellar motor switch protein FliN/FliY
|
|
SCNpilot_expt_1000_bf_scaffold_3864_curated_14
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(11083..11217)
|
Flagellar motor switch protein FliM n=1 Tax=Shinella zoogloeoides DD12 RepID=V5C7J5_9RHIZ
Flagellar motor switch protein FliM {ECO:0000313|EMBL:EYR82021.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
fliM; flagellar motor switch protein FliM; K02416 flagellar motor switch protein FliM
|
|
SCNpilot_expt_1000_bf_scaffold_3864_curated_15
unknown
|
Not on your lists |
11341..11811
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_3864_curated_16
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(11994..12872)
|
Motility protein A {ECO:0000313|EMBL:EYR82020.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
flagellar motor protein MotA n=1 Tax=Rhizobium sp. (strain BR816) RepID=UPI000366E5D3
rbh
motA; flagellar motor protein MotA; K02556 chemotaxis protein MotA
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_3864_curated_17
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
13043..13822
|
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5C751_9RHIZ
rbh
Uncharacterized protein {ECO:0000313|EMBL:EYR82019.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_3864_curated_18
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
13824..14549
|
Flagellar basal-body rod protein FlgF n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EPX2_9RHIZ
rbh
Flagellar basal-body rod protein FlgF {ECO:0000313|EMBL:EYR82018.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
flgF; flagellar basal body rod protein FlgF; K02391 flagellar basal-body rod protein FlgF
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_3864_curated_19
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
14574..15965
|
Flagellum-specific ATP synthase FliI n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CSF4_9RHIZ
rbh
Flagellum-specific ATP synthase FliI {ECO:0000313|EMBL:EYR82017.1}; EC=3.6.3.14 {ECO:0000313|EMBL:EYR82017.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
fliI; flagellum-specific ATP synthase FliI; K02412 flagellum-specific ATP synthase [EC:3.6.3.14]
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_3864_curated_20
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
15962..16528
|
Putative transmembrane protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CX35_9RHIZ
rbh
Putative transmembrane protein {ECO:0000313|EMBL:EYR82016.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_3864_curated_21
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
16713..17093
|
Flagellar basal body protein {ECO:0000313|EMBL:EYR82015.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
flgB; flagellar basal body rod protein FlgB
Flagellar basal body rod protein n=1 Tax=Sinorhizobium medicae (strain WSM419) RepID=A6U634_SINMW
|
|
SCNpilot_expt_1000_bf_scaffold_3864_curated_22
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
17097..17516
|
Flagellar basal-body rod protein FlgC {ECO:0000256|RuleBase:RU362062}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
flgC; flagellar basal body rod protein FlgC; K02388 flagellar basal-body rod protein FlgC
Flagellar basal-body rod protein FlgC n=1 Tax=Rhizobium sp. (strain NGR234) RepID=C3MG22_RHISN
|
|
SCNpilot_expt_1000_bf_scaffold_3864_curated_23
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
17513..17845
|
Flagellar hook-basal body complex protein FliE n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CMB7_9RHIZ
Flagellar hook-basal body complex protein FliE {ECO:0000256|HAMAP-Rule:MF_00724, ECO:0000256|SAAS:SAAS00116622}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
fliE; flagellar hook-basal body protein FliE; K02408 flagellar hook-basal body complex protein FliE
|
|
SCNpilot_expt_1000_bf_scaffold_3864_curated_24
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
17855..18637
|
Flagellar basal-body rod protein FlgG n=1 Tax=Shinella zoogloeoides DD12 RepID=V5C6I7_9RHIZ
rbh
Flagellar basal-body rod protein FlgG {ECO:0000313|EMBL:EYR82012.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
flgG; flagellar basal body rod protein FlgG; K02392 flagellar basal-body rod protein FlgG
rbh
|